RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SNX29Q8TEQ0 813 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 SLC9A2Q9UBY0 812 aa24.44■■□□□ 1.5
VCPKMT-204ENST00000491402 WDR81Q562E7 1941 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 A0A087X0B3 334 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 SORBS3O60504 671 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 CCNE2O96020 404 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 SYKP43405 635 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 TMEM63BQ5T3F8 832 aa24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 ZNF746Q6NUN9 644 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 FMR1NBQ8N0W7 255 aaPredicted RBP24.43■■□□□ 1.5
VCPKMT-204ENST00000491402 FARP2O94887 1054 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 GGPS1O95749 300 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 ZNF865P0CJ78 1059 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 KARSQ15046 597 aaKnown RBP24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 KLHL40Q2TBA0 621 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 CCDC144BQ3MJ40 725 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 HAUS3Q68CZ6 603 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 METTL7BQ6UX53 244 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 PDILTQ8N807 584 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 ERMNQ8TAM6 284 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 TRAK2O60296 914 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 SKOR2Q2VWA4 1001 aaPredicted RBP24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 MIER3Q7Z3K6 550 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 TRPV1Q8NER1 839 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 PANK2Q9BZ23 570 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 DACT1Q9NYF0 836 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 SAMM50Q9Y512 469 aa24.42■■□□□ 1.5
VCPKMT-204ENST00000491402 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 WDR64B1ANS9 1081 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 POLR2DO15514 142 aaKnown RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 SFNP31947 248 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 JAK3P52333 1124 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 SP4Q02446 784 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 ZRSR1Q15695 479 aaKnown RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 CELF3Q5SZQ8 465 aaKnown RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 MAP3K21Q5TCX8 1036 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 SMAP1Q8IYB5 467 aaPredicted RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 RASSF8Q8NHQ8 419 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 EIF2AK1Q9BQI3 630 aaKnown RBP24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 DISC1Q9NRI5 854 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 STK24Q9Y6E0 443 aa24.41■■□□□ 1.5
VCPKMT-204ENST00000491402 ZNF202O95125 648 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 CCT6AP40227 531 aaKnown RBP24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 IQSEC1Q6DN90 963 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 COPS5Q92905 334 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 CALML4Q96GE6 196 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 MLXIPQ9HAP2 919 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 CCDC39Q9UFE4 941 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 NRBP1Q9UHY1 535 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 TELO2Q9Y4R8 837 aa24.4■■□□□ 1.5
VCPKMT-204ENST00000491402 CYBAP13498 195 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 RPA1P27694 616 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 CNGA1P29973 690 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 CCND3P30281 292 aaPredicted RBP24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 ACTR2P61160 394 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 EPHA7Q15375 998 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 MTFR1Q15390 333 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 DUSP28Q4G0W2 176 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 GJC2Q5T442 439 aaPredicted RBP24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 RDM1Q8NG50 284 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 ARMC5Q96C12 935 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 HSD17B14Q9BPX1 270 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 KDM3AQ9Y4C1 1321 aa24.39■■□□□ 1.5
VCPKMT-204ENST00000491402 ADCY6O43306 1168 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 MED24O75448 989 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 SPATA31C1P0DKV0 1188 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 SMPD1P17405 629 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 PTGS1P23219 599 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 CYP4A11Q02928 519 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 CATSPER3Q86XQ3 398 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 DHX37Q8IY37 1157 aaKnown RBP24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 ZNF333Q96JL9 665 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 RGL1Q9NZL6 768 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 PCDHA10Q9Y5I2 948 aa24.39■■□□□ 1.49
VCPKMT-204ENST00000491402 POTEB3A0JP26 581 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 SLC26A4O43511 780 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 PLCG1P19174 1290 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 TNFAIP2Q03169 654 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 GRB10Q13322 594 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 E2F4Q16254 413 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 ECM1Q16610 540 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 HYIQ5T013 277 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 POTEBQ6S5H4 581 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 DHX58Q96C10 678 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 CDK5RAP3Q96JB5 506 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 PLIN2Q99541 437 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 PYM1Q9BRP8 204 aaKnown RBP24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 POLR3CQ9BUI4 534 aaPredicted RBP24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 UNC93B1Q9H1C4 597 aa24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 HMX1Q9NP08 348 aaPredicted RBP24.38■■□□□ 1.49
VCPKMT-204ENST00000491402 MYH9P35579 1960 aaKnown RBP24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 NKRFO15226 690 aaKnown RBP eCLIP24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 KINO60870 393 aaKnown RBP24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 GH1P01241 217 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 ARHGAP1Q07960 439 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 HSDL1Q3SXM5 330 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 RRAGBQ5VZM2 374 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 NEK9Q8TD19 979 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 DYDC2Q96IM9 177 aa24.37■■□□□ 1.49
VCPKMT-204ENST00000491402 PNMA5Q96PV4 448 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms