RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
FDPS-216ENST00000491013 SDF4Q9BRK5 362 aa16.72■□□□□ 0.27
FDPS-216ENST00000491013 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
FDPS-216ENST00000491013 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
FDPS-216ENST00000491013 EDIL3O43854 480 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 IQCF3P0C7M6 154 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 SMIM10L2AP0DMW4 78 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 SMIM10L2BP0DMW5 78 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 ACRP10323 421 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 USP11P51784 963 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 ZNF200P98182 395 aaPredicted RBP16.71■□□□□ 0.27
FDPS-216ENST00000491013 RBL2Q08999 1139 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 PTK7Q13308 1070 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 ZNF365Q70YC5 407 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 TRIM50Q86XT4 487 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
FDPS-216ENST00000491013 CCDC155Q8N6L0 562 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 RETREG2Q8NC44 543 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
FDPS-216ENST00000491013 VWCEQ96DN2 955 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 PHF20Q9BVI0 1012 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 RNPEPQ9H4A4 650 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 ORC3Q9UBD5 711 aaPredicted RBP16.71■□□□□ 0.27
FDPS-216ENST00000491013 GBF1Q92538 1859 aa16.71■□□□□ 0.27
FDPS-216ENST00000491013 C17orf102A2RUQ5 167 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 DHX15O43143 795 aaKnown RBP16.7■□□□□ 0.26
FDPS-216ENST00000491013 LGR5O75473 907 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
FDPS-216ENST00000491013 XBP1P17861 261 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 RFC2P35250 354 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 SETQ01105 290 aaPredicted RBP16.7■□□□□ 0.26
FDPS-216ENST00000491013 NSUN7Q8NE18 718 aaKnown RBP16.7■□□□□ 0.26
FDPS-216ENST00000491013 AFAP1L1Q8TED9 768 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 WASF1Q92558 559 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 KCNJ14Q9UNX9 436 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 LIMCH1Q9UPQ0 1083 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
FDPS-216ENST00000491013 IPO5O00410 1097 aaKnown RBP16.69■□□□□ 0.26
FDPS-216ENST00000491013 DTNBO60941 627 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 ATG7O95352 703 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 FGBP02675 491 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 PFKMP08237 780 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 ACTR2P61160 394 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 TRIM71Q2Q1W2 868 aaKnown RBP16.69■□□□□ 0.26
FDPS-216ENST00000491013 SERINC5Q86VE9 423 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 TBCKQ8TEA7 893 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 ATP6V0A1Q93050 837 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 LENG9Q96B70 501 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 PCYT2Q99447 389 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 ERAP1Q9NZ08 941 aa16.69■□□□□ 0.26
FDPS-216ENST00000491013 GNAT1P11488 350 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 CKBP12277 381 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 SELPP16109 830 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 ADAM17P78536 824 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
FDPS-216ENST00000491013 ST3GAL1Q11201 340 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 PRR16Q569H4 304 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 GLG1Q92896 1179 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 WNT8BQ93098 351 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 ZNF577Q9BSK1 485 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 GJB4Q9NTQ9 266 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 TBC1D22BQ9NU19 505 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 SETD4Q9NVD3 440 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 EVPLQ92817 2033 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 NRCAMQ92823 1304 aa16.68■□□□□ 0.26
FDPS-216ENST00000491013 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 LOXHD1Q8IVV2 1947 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 CYP3A7-CYP3A51PA0A087WV96 503 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 IGKV6D-21A0A0A0MT36 114 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 TREHO43280 583 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 PARNO95453 639 aaKnown RBP16.67■□□□□ 0.26
FDPS-216ENST00000491013 CCNE2O96020 404 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 CYP3A7P24462 503 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 ABHD15Q6UXT9 468 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 LRRC8DQ7L1W4 858 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 PLPPR4Q7Z2D5 763 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 KRT25Q7Z3Z0 450 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 DEFB128Q7Z7B8 93 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
FDPS-216ENST00000491013 AZI2Q9H6S1 392 aa16.67■□□□□ 0.26
FDPS-216ENST00000491013 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 DDX39AO00148 427 aaKnown RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 MSH4O15457 936 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 JAK2O60674 1132 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 STAT5BP51692 787 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 GPNMBQ14956 572 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 NONOQ15233 471 aaKnown RBP eCLIP16.66■□□□□ 0.26
FDPS-216ENST00000491013 Q4G0T1 1027 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 FAM109BQ6ICB4 259 aaPredicted RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 ZNF746Q6NUN9 644 aaPredicted RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 TRAF7Q6Q0C0 670 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 MOXD1Q6UVY6 613 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 OTOP2Q7RTS6 562 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 LMBR1Q8WVP7 490 aa16.66■□□□□ 0.26
FDPS-216ENST00000491013 MTIF3Q9H2K0 278 aaKnown RBP16.66■□□□□ 0.26
FDPS-216ENST00000491013 CXXC1Q9P0U4 656 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms