RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 AK8Q96MA6 479 aa21.24■□□□□ 0.99
SNAPC3-206ENST00000490969 PCDHGC5Q9Y5F6 944 aa21.24■□□□□ 0.99
SNAPC3-206ENST00000490969 KLRC1P26715 233 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 KIF5BP33176 963 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 CTNNA1P35221 906 aaKnown RBP21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 AMPD3Q01432 767 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 SLC9C1Q4G0N8 1177 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 CACNA2D3Q8IZS8 1091 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 LRRC45Q96CN5 670 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 LUC7LQ9NQ29 371 aaKnown RBP21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 TMEM59LQ9UK28 342 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 USP17L12C9JPN9 530 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 USP17L21D6R901 530 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 GPSM2P81274 684 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 EVX2Q03828 476 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 BYSLQ13895 437 aaKnown RBP21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 LACTB2Q53H82 288 aaPredicted RBP21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 RUFY4Q6ZNE9 571 aa21.23■□□□□ 0.99
SNAPC3-206ENST00000490969 ANKRD31Q8N7Z5 1873 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 HIBADHP31937 336 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 PPP2R2AP63151 447 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 CUL1Q13616 776 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 ZNF622Q969S3 477 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 ANKRD2Q9GZV1 360 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 ORC4O43929 436 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 FGFR1OPO95684 399 aaKnown RBP21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 PAEPP09466 180 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 XRCC4Q13426 336 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 ODF2Q5BJF6 829 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 PDGFDQ9GZP0 370 aaPredicted RBP21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 NLRC4Q9NPP4 1024 aa21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 BCCIPQ9P287 314 aaKnown RBP eCLIP21.22■□□□□ 0.99
SNAPC3-206ENST00000490969 BACH1O14867 736 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 MMP10P09238 476 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 ERCC3P19447 782 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 IFFO1Q0D2I5 559 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 E2F5Q15329 346 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 ARMC9Q7Z3E5 817 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 RAPGEF5Q92565 580 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 CNOT8Q9UFF9 292 aaKnown RBP21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 CACNA1SQ13698 1873 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 CCDC189A1A4V9 331 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 TLR2O60603 784 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 SERPING1P05155 500 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 SFMBT2Q5VUG0 894 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 TATDN2Q93075 761 aa21.21■□□□□ 0.99
SNAPC3-206ENST00000490969 OR52Z1P0C646 297 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 SLC8A1P32418 973 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 KCNMA1Q12791 1236 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 CRYMQ14894 314 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 AGBL2Q5U5Z8 902 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 STAG2Q8N3U4 1231 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 P3H4Q92791 437 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 OPLAHO14841 1288 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 ATP2C2O75185 946 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 PRDX5P30044 214 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 GRIK5Q16478 980 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 GKAP1Q5VSY0 366 aaPredicted RBP21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 LRRC55Q6ZSA7 311 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 ARHGAP27Q6ZUM4 889 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 TAX1BP1Q86VP1 789 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 TEX11Q8IYF3 940 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 DAGLBQ8NCG7 672 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 TAF4BQ92750 862 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 TANGO6Q9C0B7 1094 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 ATP6V0A4Q9HBG4 840 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 CEP72Q9P209 647 aa21.2■□□□□ 0.98
SNAPC3-206ENST00000490969 DDX42Q86XP3 938 aaKnown RBP eCLIP21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 CCT6BQ92526 530 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 SYN2Q92777 582 aaPredicted RBP21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 NUCKS1Q9H1E3 243 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 MGRN1O60291 552 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 RCSD1Q6JBY9 416 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 TLDC1Q6P9B6 456 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 TBC1D5Q92609 795 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 HVCN1Q96D96 273 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 NEUROG2Q9H2A3 272 aa21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 NOVA2Q9UNW9 492 aaKnown RBP21.19■□□□□ 0.98
SNAPC3-206ENST00000490969 DNAJC8O75937 253 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 CLNS1AP54105 237 aaKnown RBP21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 LRRC63Q05C16 580 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 SLC18A3Q16572 532 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 KIAA0753Q2KHM9 967 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 GUF1Q8N442 669 aaKnown RBP21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 UBLCP1Q8WVY7 318 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 CAMKK2Q96RR4 588 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 FBXL5Q9UKA1 691 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 ATP6V0A2Q9Y487 856 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 KLRG2A4D1S0 409 aaPredicted RBP21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 CES2O00748 559 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 KCNK3O14649 394 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 GHRP10912 638 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 FAM83BQ5T0W9 1011 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 CPLX4Q7Z7G2 160 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 SCFD2Q8WU76 684 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 FAXDC2Q96IV6 333 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 PACSIN1Q9BY11 444 aa21.18■□□□□ 0.98
SNAPC3-206ENST00000490969 KDM4CQ9H3R0 1056 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms