RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 LRRC37BQ96QE4 947 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 STRBPQ96SI9 672 aaKnown RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 HSD3B7Q9H2F3 369 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 TYW1Q9NV66 732 aaKnown RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM153AQ9UHL3 310 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 TNRQ92752 1358 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 AGPSO00116 658 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 TRAPPC3O43617 180 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ORC4O43929 436 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 AGTP01019 485 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ATF3P18847 181 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 KLK7P49862 253 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 USP38Q8NB14 1042 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 EDEM3Q9BZQ6 932 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 PLAGL2Q9UPG8 496 aa12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.26□□□□□ -0.45
CRNKL1-204ENST00000490910 ZSCAN5CA6NGD5 496 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 ACSL3O95573 720 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 EEF2P13639 858 aaKnown RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 NCAPD2Q15021 1401 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM47AQ5JRC9 791 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKRD40Q6AI12 368 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 APLFQ8IW19 511 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 MLH3Q9UHC1 1453 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 ZNF233A6NK53 670 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 OPLAHO14841 1288 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 COPS2P61201 443 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 UAP1Q16222 522 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 CRELD2Q6UXH1 353 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 EGFL6Q8IUX8 553 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 DNAJC9Q8WXX5 260 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 LARP4BQ92615 738 aaKnown RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 NEURL4Q96JN8 1562 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 TTI1O43156 1089 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 PRKAB2O43741 272 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 ADCY8P40145 1251 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 TOB1P50616 345 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 CCNHP51946 323 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 RCN2Q14257 317 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 PRDM11Q9NQV5 511 aa12.25□□□□□ -0.45
CRNKL1-204ENST00000490910 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 A0A1W2PQJ5 194 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 FANCGO15287 622 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 PLEKHA8P1O95397 391 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 CDC25CP30307 473 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 TGS1Q96RS0 853 aaKnown RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 PCDHA4Q9UN74 947 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 NEK8Q86SG6 692 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 PROCA1Q8NCQ7 364 aaPredicted RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 KAZALD1Q96I82 304 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM129AQ9BZQ8 928 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 VPS37BQ9H9H4 285 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 BRAFP15056 766 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 ARHGAP44Q17R89 818 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 GALNT17Q6IS24 598 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 FBXL16Q8N461 479 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 MAGEC3Q8TD91 643 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 FGFR1OP2Q9NVK5 253 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 ANGPTL2Q9UKU9 493 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 PCDHB13Q9Y5F0 798 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
CRNKL1-204ENST00000490910 USP17L12C9JPN9 530 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 USP17L21D6R901 530 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 PODXLO00592 558 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM13AO94988 1023 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 RCAN1P53805 252 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 AGGF1Q8N302 714 aaeCLIP12.23□□□□□ -0.451e-8■□□□□ 9.4
CRNKL1-204ENST00000490910 MAIP1Q8WWC4 291 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 ERGIC2Q96RQ1 377 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 PIH1D3Q9NQM4 214 aaKnown RBP12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 CDC42BPGQ6DT37 1551 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 CAND2O75155 1236 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 UBOX5O94941 541 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 BAG3O95817 575 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 LMNB1P20700 586 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 MCAMP43121 646 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 ICA1Q05084 483 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 HAUS1Q96CS2 278 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 INTUQ9ULD6 942 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 G3BP2Q9UN86 482 aaKnown RBP12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 FAF1Q9UNN5 650 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms