RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 SUPT20HL1Q3ZLR7 823 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 DCAF15Q66K64 600 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 TTBK2Q6IQ55 1244 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 TMTC3Q6ZXV5 915 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 CDC37L1Q7L3B6 337 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 RGL4Q8IZJ4 473 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 GMCL1P1Q8NEA9 526 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 NUDT8Q8WV74 236 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 AIFM3Q96NN9 605 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 WRNIP1Q96S55 665 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 MAP3K14Q99558 947 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 CPVLQ9H3G5 476 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 CWC22Q9HCG8 908 aaKnown RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 GJB4Q9NTQ9 266 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 SMC3Q9UQE7 1217 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 MTMR7Q9Y216 660 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 TMX2Q9Y320 296 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 SNCAIPQ9Y6H5 919 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 FRMPD2Q68DX3 1309 aaPredicted RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 LOC285556D6RIA3 1793 aa5.64□□□□□ -1.51
EPCAM-206ENST00000490733 COL11A1P12107 1806 aaPredicted RBP5.64□□□□□ -1.51
EPCAM-206ENST00000490733 hCG_1642624A0A1W2PR95 340 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 F5H6K3 240 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 FAM229AH3BQW9 127 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 LILRB5O75023 590 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 MAP3K6O95382 1288 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 NDUFB10O96000 172 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 ASNSP08243 561 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SPATA31C1P0DKV0 1188 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CALM1P0DP23 149 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CALM2P0DP24 149 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CALM3P0DP25 149 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 RARAP10276 462 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 PTPRAP18433 802 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SYT1P21579 422 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 BRD2P25440 801 aaKnown RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 ATP2B2Q01814 1243 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 KLRC3Q07444 240 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 ZNF543Q08ER8 600 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 VGLL4Q14135 290 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 PPP2R5BQ15173 497 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 MAP3K11Q16584 847 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 NOL9Q5SY16 702 aaKnown RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SLFN13Q68D06 897 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 PSAPL1Q6NUJ1 521 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SYNE3Q6ZMZ3 975 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 LDHDQ86WU2 507 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SCYL3Q8IZE3 742 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CTCFLQ8NI51 663 aaPredicted RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 HOOK2Q96ED9 719 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CHAMP1Q96JM3 812 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CLMNQ96JQ2 1002 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 NUP88Q99567 741 aaPredicted RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 UBA5Q9GZZ9 404 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SEMA6BQ9H3T3 888 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 JPH1Q9HDC5 661 aaPredicted RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CABP5Q9NP86 173 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 C11orf16Q9NQ32 467 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 RBM28Q9NW13 759 aaKnown RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 ORC3Q9UBD5 711 aaPredicted RBP5.63□□□□□ -1.51
EPCAM-206ENST00000490733 SYNPO2Q9UMS6 1093 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 MTMR6Q9Y217 621 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 KCNMB2Q9Y691 235 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 STK36Q9NRP7 1315 aa5.63□□□□□ -1.51
EPCAM-206ENST00000490733 CCDC196A0A1B0GTZ2 297 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 KLRF2D3W0D1 207 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 CPLX1O14810 134 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 ADAMTS3O15072 1205 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 PRPF3O43395 683 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 DHX16O60231 1041 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 XYLBO75191 536 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 BRD1O95696 1058 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 PARP1P09874 1014 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 CPB1P15086 417 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 KIF5BP33176 963 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 SLC16A2P36021 539 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 HMGN5P82970 282 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 MLLT1Q03111 559 aaPredicted RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 SSRP1Q08945 709 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 ZYXQ15942 572 aaKnown RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 ASPRV1Q53RT3 343 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 LDLRAD1Q5T700 205 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 CST9Q5W186 159 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 OTUD7BQ6GQQ9 843 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 KCTD1Q719H9 257 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 FAM35AQ86V20 835 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 SPICE1Q8N0Z3 855 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 DCAF4Q8WV16 495 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 MTMR8Q96EF0 704 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 WDR18Q9BV38 432 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 SPZ1Q9BXG8 430 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 SLC26A6Q9BXS9 759 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 RNF26Q9BY78 433 aaPredicted RBP5.62□□□□□ -1.51
EPCAM-206ENST00000490733 RIOX1Q9H6W3 641 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 VCPKMTQ9H867 229 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 GINM1Q9NU53 330 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 CHMP5Q9NZZ3 219 aa5.62□□□□□ -1.51
EPCAM-206ENST00000490733 AFG3L2Q9Y4W6 797 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms