RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ARHGAP6O43182 974 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 PSMC5P62195 406 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 SLC9A2Q9UBY0 812 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 POTEFA5A3E0 1075 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 TUBB4AP04350 444 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 POTEIP0CG38 1075 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 RNASE9P60153 205 aaKnown RBP15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 POTEEQ6S8J3 1075 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 MAATS1Q7Z4T9 603 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 ALDH8A1Q9H2A2 487 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 JMJD4Q9H9V9 463 aa15.74■□□□□ 0.11
ARHGEF39-205ENST00000490638 CCNE1P24864 410 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 STAT5BP51692 787 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 PAGE5Q96GU1 130 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 JPH1Q9HDC5 661 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 AK9Q5TCS8 1911 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 IMPACTQ9P2X3 320 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 GOLGA8IPA6NC78 632 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 GOLGA8JA6NMD2 632 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 PTK2Q05397 1052 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 TROAPQ12815 778 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 PSMD2Q13200 908 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 ILDR1Q86SU0 546 aaPredicted RBP15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 LXNQ9BS40 222 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 MSTO1Q9BUK6 570 aa15.73■□□□□ 0.11
ARHGEF39-205ENST00000490638 CLDN3O15551 220 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 LEKR1Q6ZMV7 388 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 CYFIP1Q7L576 1253 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ADGRA1Q86SQ6 560 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 OR6J1Q8NGC5 347 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 RPF1Q9H9Y2 349 aaKnown RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 SSX2IPQ9Y2D8 614 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 PPP2R3BQ9Y5P8 575 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 PHKA2P46019 1235 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 MXI1P50539 228 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 MYL7Q01449 175 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 PPP1R7Q15435 360 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 SHTN1A0MZ66 631 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 PP2D1A8MPX8 630 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ADM5C9JUS6 153 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 H0YHG0 523 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 COPB1P53618 953 aaKnown RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 RPS6P62753 249 aaKnown RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ORC2Q13416 577 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 KMT5BQ4FZB7 885 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 IFIH1Q9BYX4 1025 aaKnown RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 INPP5FQ9Y2H2 1132 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 BAZ2BQ9UIF8 2168 aaKnown RBP15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ZNF233A6NK53 670 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ALCAMQ13740 583 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 SLFN12LQ6IEE8 588 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 RHPN2Q8IUC4 686 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
ARHGEF39-205ENST00000490638 POLR2BP30876 1174 aaKnown RBP15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 UBL4BQ8N7F7 174 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 CHST13Q8NET6 341 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 BBXQ8WY36 941 aaPredicted RBP15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 PDE6CP51160 858 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 METTL23Q86XA0 190 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 SCFD2Q8WU76 684 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 SEPT1Q8WYJ6 367 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 SH2D3AQ9BRG2 576 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 ZBBXA8MT70 800 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 BPIFB4P59827 614 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 EPHA7Q15375 998 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 CEP112Q8N8E3 955 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 MICAL1Q8TDZ2 1067 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 FAM149B1Q96BN6 582 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 RGL1Q9NZL6 768 aa15.71■□□□□ 0.11
ARHGEF39-205ENST00000490638 ARPP19P56211 112 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 CALCOCO2Q13137 446 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 RSRC2Q7L4I2 434 aaKnown RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SECISBP2LQ93073 1101 aaKnown RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 TSNARE1Q96NA8 513 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 EHD4Q9H223 541 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 EEF1GP26641 437 aaKnown RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 APOBEC3HQ6NTF7 200 aaKnown RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SCYL2Q6P3W7 929 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SFR1Q86XK3 245 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 CCDC77Q9BR77 488 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SNX25Q9H3E2 840 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 FAM184BQ9ULE4 1060 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 PCDHB4Q9Y5E5 795 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SALL1Q9NSC2 1324 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 CASP1P29466 404 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 MAN2A1Q16706 1144 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 FAM163AQ96GL9 167 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 PSMB7Q99436 277 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 NAP1L3Q99457 506 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 EIF2AK1Q9BQI3 630 aaKnown RBP15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 MIS12Q9H081 205 aa15.7■□□□□ 0.1
ARHGEF39-205ENST00000490638 SLC16A4O15374 487 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms