RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DDR1Q08345 913 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 TCIRG1Q13488 830 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 GNL2Q13823 731 aaKnown RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 KRT24Q2M2I5 525 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 C9orf131Q5VYM1 1079 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 PRR5LQ6MZQ0 368 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 TTLL7Q6ZT98 887 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 TSPYL5Q86VY4 417 aaPredicted RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 VPS37DQ86XT2 251 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 WFDC3Q8IUB2 231 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 C8orf58Q8NAV2 365 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 LRRN4CLQ8ND94 238 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 CPLX3Q8WVH0 158 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 MASTLQ96GX5 879 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 RBM17Q96I25 401 aaKnown RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 ALPK1Q96QP1 1244 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 MCOLN1Q9GZU1 580 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 MKRN2Q9H000 416 aaKnown RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 DUSP15Q9H1R2 295 aaPredicted RBP5.83□□□□□ -1.48
CSTF1-205ENST00000490539 RCAN3Q9UKA8 241 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 INPP5FQ9Y2H2 1132 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 PKD1L2Q7Z442 2459 aa5.83□□□□□ -1.48
CSTF1-205ENST00000490539 IBTKQ9P2D0 1353 aaPredicted RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 SH3TC1Q8TE82 1336 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 TNFRSF10CO14798 259 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 LRRN2O75325 713 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 UBOX5O94941 541 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 PAPLNO95428 1278 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 ANXA1P04083 346 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 NPR1P16066 1061 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 RBM25P49756 843 aaKnown RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 NMIQ13287 307 aaPredicted RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 PKN1Q16512 942 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 HLFQ16534 295 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 STYK1Q6J9G0 422 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 KSR2Q6VAB6 950 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 TAB3Q8N5C8 712 aaPredicted RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 DHX38Q92620 1227 aaKnown RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 PRDM7Q9NQW5 492 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 CWC25Q9NXE8 425 aaPredicted RBP5.82□□□□□ -1.48
CSTF1-205ENST00000490539 ADAMTS6Q9UKP5 1117 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 EFR3BQ9Y2G0 817 aa5.82□□□□□ -1.48
CSTF1-205ENST00000490539 SRFP11831 508 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 ERCC5P28715 1186 aaPredicted RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 CHRNA5P30532 468 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 POLR2BP30876 1174 aaKnown RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 GDNFP39905 211 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 EIF6P56537 245 aaKnown RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 SOX10P56693 466 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 EGR3Q06889 387 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 PROSER3Q2NL68 480 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 BBS9Q3SYG4 887 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 NBPF12Q5TAG4 269 aaPredicted RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 DDX46Q7L014 1031 aaKnown RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 ZNF34Q8IZ26 560 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 RTKN2Q8IZC4 609 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 TSPYL6Q8N831 410 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 RBBP8NLQ8NC74 664 aaPredicted RBP5.81□□□□□ -1.48
CSTF1-205ENST00000490539 CCDC191Q8NCU4 936 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 OR6P1Q8NGX9 317 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 RASGRP4Q8TDF6 673 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 SLC6A18Q96N87 628 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 SLAMF8Q9P0V8 285 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 FBXL21Q9UKT6 434 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 PPT2Q9UMR5 302 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 HDAC5Q9UQL6 1122 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 MAP3K2Q9Y2U5 619 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 SLC12A7Q9Y666 1083 aa5.81□□□□□ -1.48
CSTF1-205ENST00000490539 CNTNAP1P78357 1384 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SCN7AQ01118 1682 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PI4KAP2A4QPH2 592 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 IPO8O15397 1037 aaKnown RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 VAMP4O75379 141 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 FARP2O94887 1054 aaPredicted RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 ESR1P03372 595 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SRGNP10124 158 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 TCF3P15923 654 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 GUCY2CP25092 1073 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PLA2G5P39877 138 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SLFN5Q08AF3 891 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 NBPF9Q3BBW0 867 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 ALDH1L2Q3SY69 923 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 CCDC152Q4G0S7 254 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SUSD4Q5VX71 490 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 TTC6Q86TZ1 520 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 NLRP10Q86W26 655 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 CCDC144CPQ8IYA2 1237 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 ZNF655Q8N720 491 aaPredicted RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PI4KAP1Q8N8J0 262 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 ZBTB38Q8NAP3 1195 aaPredicted RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 DAGLBQ8NCG7 672 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 EXOC6Q8TAG9 804 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SYTL5Q8TDW5 730 aaPredicted RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 VWCEQ96DN2 955 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SEC16BQ96JE7 1060 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 SLC9A7Q96T83 725 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 MYD88Q99836 296 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PHAXQ9H814 394 aaKnown RBP5.8□□□□□ -1.48
CSTF1-205ENST00000490539 CAPN10Q9HC96 672 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms