RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 CYP2W1Q8TAV3 490 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 LMBR1Q8WVP7 490 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 PHKBQ93100 1093 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 JPH1Q9HDC5 661 aaPredicted RBP11.84□□□□□ -0.51
RBM39-236ENST00000490484 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
RBM39-236ENST00000490484 TRANK1O15050 2925 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 RSPH10B2B2RC85 870 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 FOSP01100 380 aaPredicted RBP11.83□□□□□ -0.52
RBM39-236ENST00000490484 CXCL10P02778 98 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 RSPH10BP0C881 870 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 SREBF1P36956 1147 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 DEFB103AP81534 67 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 PHOSPHO2Q8TCD6 241 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 GLG1Q92896 1179 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 AGXT2Q9BYV1 514 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 GLT8D2Q9H1C3 349 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 NCOA5Q9HCD5 579 aaKnown RBP11.83□□□□□ -0.52
RBM39-236ENST00000490484 KCNH7Q9NS40 1196 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 EMSYQ7Z589 1322 aa11.83□□□□□ -0.52
RBM39-236ENST00000490484 GSTTP1A0A1W2PQM5 241 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 DLL1O00548 723 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 LGR5O75473 907 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 ARHGEF15O94989 841 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 GNAT1P11488 350 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 IGFBP4P22692 258 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
RBM39-236ENST00000490484 CCT2P78371 535 aaKnown RBP11.82□□□□□ -0.52
RBM39-236ENST00000490484 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
RBM39-236ENST00000490484 PPFIA1Q13136 1202 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 ADGRE1Q14246 886 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 CEP55Q53EZ4 464 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 RUFY3Q7L099 469 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 REXO1Q8N1G1 1221 aaKnown RBP11.82□□□□□ -0.52
RBM39-236ENST00000490484 FBXL16Q8N461 479 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 PPM1EQ8WY54 764 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 SEPT1Q8WYJ6 367 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 SDF4Q9BRK5 362 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 SLC26A6Q9BXS9 759 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
RBM39-236ENST00000490484 CERS4Q9HA82 394 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 ERAP1Q9NZ08 941 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 SLC9A2Q9UBY0 812 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 REV3LO60673 3130 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 NRCAMQ92823 1304 aa11.82□□□□□ -0.52
RBM39-236ENST00000490484 COL4A4P53420 1690 aaPredicted RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 ABHD14A-ACY1A0A1B0GW23 586 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 ESYT2A0FGR8 921 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 KIF28PB7ZC32 967 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 DDX39AO00148 427 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 ADAMTS3O15072 1205 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 MAFGO15525 162 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 PRPF3O43395 683 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 EPB41L2O43491 1005 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 TLL1O43897 1013 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 CAND2O75155 1236 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 ARP10275 920 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 PDIA3P30101 505 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 ZNF76P36508 570 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 ACTR2P61160 394 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 IKBKEQ14164 716 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 PKN1Q16512 942 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 RUFY4Q6ZNE9 571 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 CCDC12Q8WUD4 166 aaPredicted RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 RNF26Q9BY78 433 aaPredicted RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 ZSWIM6Q9HCJ5 1215 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 AGO4Q9HCK5 861 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 PPP4R2Q9NY27 417 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 CYP46A1Q9Y6A2 500 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 XIRP2A4UGR9 3374 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 SIP14410 1827 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
RBM39-236ENST00000490484 MYO9BQ13459 2157 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 MICAL3Q7RTP6 2002 aa11.81□□□□□ -0.52
RBM39-236ENST00000490484 LCHNA4D1U4 455 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 FAM86B1E9PN63 330 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 EFCAB14O75071 495 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 FAM86B2P0C5J1 330 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 IGBP1P78318 339 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 ADAM17P78536 824 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 TAP1Q03518 808 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 GRIK4Q16099 956 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 NTRK3Q16288 839 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.8□□□□□ -0.52
RBM39-236ENST00000490484 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 CCDC148Q8NFR7 591 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
RBM39-236ENST00000490484 RASGRP4Q8TDF6 673 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms