RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 UTP14CQ5TAP6 766 aaKnown RBP12.28□□□□□ -0.44
VPS13D-210ENST00000489961 MIS18BP1Q6P0N0 1132 aa12.28□□□□□ -0.44
VPS13D-210ENST00000489961 SMAP1Q8IYB5 467 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-210ENST00000489961 ZSCAN16Q9H4T2 348 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-210ENST00000489961 AZI2Q9H6S1 392 aa12.28□□□□□ -0.44
VPS13D-210ENST00000489961 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-210ENST00000489961 ZNF215Q9UL58 517 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-210ENST00000489961 SAMM50Q9Y512 469 aa12.28□□□□□ -0.44
VPS13D-210ENST00000489961 SCN10AQ9Y5Y9 1956 aa12.28□□□□□ -0.44
VPS13D-210ENST00000489961 WDR64B1ANS9 1081 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 H3BRB1 525 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 ARVCFO00192 962 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 BACH1O14867 736 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 ATG7O95352 703 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 CCNE2O96020 404 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 PSAPP07602 524 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 PSEN2P49810 448 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 TOB1P50616 345 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-210ENST00000489961 JAK3P52333 1124 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 CHMP4BP1P59074 171 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 PSMC6P62333 389 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 RESTQ13127 1097 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 SNX17Q15036 470 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 C1orf53Q5VUE5 145 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 FAM160B1Q5W0V3 765 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 RDM1Q8NG50 284 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 HAS1Q92839 578 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 GLG1Q92896 1179 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 GJA10Q969M2 543 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 C16orf70Q9BSU1 422 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 UNC45AQ9H3U1 944 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 TUT1Q9H6E5 874 aaKnown RBP12.27□□□□□ -0.45
VPS13D-210ENST00000489961 TELO2Q9Y4R8 837 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 PCDHB6Q9Y5E3 794 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 PCDHA10Q9Y5I2 948 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 MROH7Q68CQ1 1323 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 EMSYQ7Z589 1322 aa12.27□□□□□ -0.45
VPS13D-210ENST00000489961 LAD1O00515 517 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 CHMP2AO43633 222 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 LGR5O75473 907 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 OR52Z1P0C646 297 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 ZSCAN22P10073 491 aaPredicted RBP12.26□□□□□ -0.45
VPS13D-210ENST00000489961 TXKP42681 527 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 STAT5BP51692 787 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 RTP1P59025 263 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
VPS13D-210ENST00000489961 PPP2R5CQ13362 524 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 NBR1Q14596 966 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 MFSD10Q14728 455 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 LRRC26Q2I0M4 334 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 KIAA0753Q2KHM9 967 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 NFRKBQ6P4R8 1299 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 ABHD15Q6UXT9 468 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 MIER3Q7Z3K6 550 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 TRIM50Q86XT4 487 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 KAT2BQ92831 832 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 MTMR9Q96QG7 549 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 TMEM60Q9H2L4 133 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
VPS13D-210ENST00000489961 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.26□□□□□ -0.45
VPS13D-210ENST00000489961 DISC1Q9NRI5 854 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 ERAP1Q9NZ08 941 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 ATP11BQ9Y2G3 1177 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 WDR81Q562E7 1941 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 ALPK3Q96L96 1907 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 MYH15Q9Y2K3 1946 aa12.26□□□□□ -0.45
VPS13D-210ENST00000489961 MYH9P35579 1960 aaKnown RBP12.26□□□□□ -0.45
VPS13D-210ENST00000489961 IGKV6D-21A0A0A0MT36 114 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 HAS3O00219 553 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 TLR3O15455 904 aaKnown RBP12.25□□□□□ -0.45
VPS13D-210ENST00000489961 BMP15O95972 392 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 SLC26A2P50443 739 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 MLLT1Q03111 559 aaPredicted RBP12.25□□□□□ -0.45
VPS13D-210ENST00000489961 PTGDRQ13258 359 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 TRIM60Q495X7 471 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 FAM47CQ5HY64 1035 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 SWSAP1Q6NVH7 229 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 B3GNT9Q6UX72 402 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 PLPPR4Q7Z2D5 763 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 C7orf31Q8N865 590 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 SLC43A3Q8NBI5 491 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 AFAP1L1Q8TED9 768 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 DPF3Q92784 378 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 TNPO1Q92973 898 aaKnown RBP12.25□□□□□ -0.45
VPS13D-210ENST00000489961 ZNF302Q9NR11 478 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 VAV3Q9UKW4 847 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 CEP131Q9UPN4 1083 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 GRIN2DO15399 1336 aa12.25□□□□□ -0.45
VPS13D-210ENST00000489961 DCDC2CA8MYV0 355 aa12.24□□□□□ -0.45
VPS13D-210ENST00000489961 EVI5O60447 810 aa12.24□□□□□ -0.45
VPS13D-210ENST00000489961 PQBP1O60828 265 aaKnown RBP12.24□□□□□ -0.45
VPS13D-210ENST00000489961 F13A1P00488 732 aa12.24□□□□□ -0.45
VPS13D-210ENST00000489961 MARK3P27448 753 aa12.24□□□□□ -0.45
VPS13D-210ENST00000489961 CDK7P50613 346 aa12.24□□□□□ -0.45
VPS13D-210ENST00000489961 TLE2Q04725 743 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms