RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 THEGQ9P2T0 379 aa22.28■■□□□ 1.16
TNFRSF1B-202ENST00000489921 EMSYQ7Z589 1322 aa22.28■■□□□ 1.16
TNFRSF1B-202ENST00000489921 CDC27P30260 824 aa22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 TCF7P36402 384 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 GIMAP8Q8ND71 665 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 LMBR1Q8WVP7 490 aa22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 ASB2Q96Q27 587 aa22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 RAD9AQ99638 391 aa22.27■■□□□ 1.16
TNFRSF1B-202ENST00000489921 ZBTB43O43298 467 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 EFCAB14O75071 495 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CPA1P15085 419 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GRB10Q13322 594 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MTMR1Q13613 665 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 RTN1Q16799 776 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SYNE3Q6ZMZ3 975 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CYP2W1Q8TAV3 490 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CDHR1Q96JP9 859 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 RIC8AQ9NPQ8 531 aa22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ZNF215Q9UL58 517 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 V9GY48 417 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SPDYE3A6NKU9 549 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 STXBP3O00186 592 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CAND2O75155 1236 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 FAM26DQ5JW98 314 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MICALL1Q8N3F8 863 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SEPT1Q8WYJ6 367 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 PCYT2Q99447 389 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ZBED2Q9BTP6 218 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 NRCAMQ92823 1304 aa22.25■■□□□ 1.15
TNFRSF1B-202ENST00000489921 KLF18A0A0U1RQI7 1052 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 LINC01553A4QN01 128 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MAFGO15525 162 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CTSHP09668 335 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GNAT1P11488 350 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CLK2P49760 499 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MRPS5P82675 430 aaKnown RBP22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ARHGAP4P98171 946 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 KRT32Q14532 448 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MARCH8Q5T0T0 291 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 FAM117BQ6P1L5 589 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 RUFY4Q6ZNE9 571 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 PGBD1Q96JS3 809 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MXRA8Q9BRK3 442 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 PKD2L1Q9P0L9 805 aa22.24■■□□□ 1.15
TNFRSF1B-202ENST00000489921 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 CHRNA1P02708 482 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ADD1P35611 737 aaKnown RBP22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 NAPAP54920 295 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ERVK-21P61565 698 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 HTRA4P83105 476 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 PPP1R18Q6NYC8 613 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 KCNH7Q9NS40 1196 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 BARHL2Q9NY43 387 aa22.23■■□□□ 1.15
TNFRSF1B-202ENST00000489921 TCF20Q9UGU0 1960 aaKnown RBP22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GOLGA8AA7E2F4 631 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GOLGA8BA8MQT2 603 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ADAMTS3O15072 1205 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ARP10275 920 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 RCAN1P53805 252 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 TFF2Q03403 129 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 RPAINQ86UA6 219 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 TEX2Q8IWB9 1127 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SUGCTQ9HAC7 445 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 TMEM260Q9NX78 707 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SNX14Q9Y5W7 946 aa22.22■■□□□ 1.15
TNFRSF1B-202ENST00000489921 NCOR1O75376 2440 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MBLAC1A4D2B0 266 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SMCO2A6NFE2 343 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GTPBP6O43824 516 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 HMGB1P09429 215 aaKnown RBP22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MARK3P27448 753 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 HSPA4P34932 840 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 MGAT3Q09327 533 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 SP7Q8TDD2 431 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 GDPD5Q8WTR4 605 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ANO3Q9BYT9 981 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 ERAP1Q9NZ08 941 aa22.21■■□□□ 1.15
TNFRSF1B-202ENST00000489921 hCG_1984214I3L0E3 225 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 MEIS1O00470 390 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 FOSP01100 380 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 AMHP03971 560 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 BMP1P13497 986 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ADCY7P51828 1080 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 APOBRQ0VD83 1088 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ITGB3BPQ13352 177 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 GRIK4Q16099 956 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 Q6ZUG5 572 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 MYOCDQ8IZQ8 938 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ZNF713Q8N859 430 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SEPT8Q92599 483 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TOP1MTQ969P6 601 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 ZBTB10Q96DT7 871 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 TGS1Q96RS0 853 aaKnown RBP22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SMARCAD1Q9H4L7 1026 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 EHMT1Q9H9B1 1298 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 INSL6Q9Y581 213 aa22.2■■□□□ 1.14
TNFRSF1B-202ENST00000489921 SREBF1P36956 1147 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PPFIA1Q13136 1202 aa22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 PFKFB3Q16875 520 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF1B-202ENST00000489921 CEP55Q53EZ4 464 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms