RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 BMP3P12645 472 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 IDEP14735 1019 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TRIM21P19474 475 aaKnown RBP10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TUBB4BP68371 445 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KRT83P78385 493 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CBX1P83916 185 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ZBED6P86452 979 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 IKQ13123 557 aaPredicted RBP10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 MEA1Q16626 185 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KIF4BQ2VIQ3 1234 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GRIPAP1Q4V328 841 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HAUS3Q68CZ6 603 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 DYMQ7RTS9 669 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 FBXO11Q86XK2 927 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CCDC65Q8IXS2 484 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 MYOCDQ8IZQ8 938 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SLC35F6Q8N357 371 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EHBP1Q8NDI1 1231 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ERMNQ8TAM6 284 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HAS1Q92839 578 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 NAPGQ99747 312 aaPredicted RBP10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SLF1Q9BQI6 1058 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TTYH3Q9C0H2 523 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KCNQ5Q9NR82 932 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PCDHA12Q9UN75 941 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SPDYE3A6NKU9 549 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 F5H6K3 240 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 RNF225M0QZC1 329 aaPredicted RBP10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TBX3O15119 743 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ST8SIA5O15466 376 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PPIP5K2O43314 1243 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GDF11O95390 407 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CHRNA5P30532 468 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ARHGAP25P42331 645 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CDK17Q00537 523 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KLRC3Q07444 240 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EHHADHQ08426 723 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 COASYQ13057 564 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 AOC3Q16853 763 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 WHAMMP3Q1A5X7 153 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 VWA3BQ502W6 1294 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TEX35Q5T0J7 233 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TMCO3Q6UWJ1 677 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SRGAP1Q7Z6B7 1085 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KIAA1328Q86T90 577 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CCDC170Q8IYT3 715 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KRT222Q8N1A0 295 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CRIPAKQ8N1N5 446 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GPR161Q8N6U8 529 aaKnown RBP10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 RABGGTAQ92696 567 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HPS3Q969F9 1004 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 NUDT12Q9BQG2 462 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HAUS4Q9H6D7 363 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ARHGEF10LQ9HCE6 1279 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KCNMB3Q9NPA1 279 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 STK32BQ9NY57 414 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HERC5Q9UII4 1024 aaKnown RBP10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CDC23Q9UJX2 597 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PCDHAC2Q9Y5I4 1007 aa10.61□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KRT18P05783 430 aaKnown RBP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PLA2G4BP0C869 781 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 SREBF1P36956 1147 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 MMP14P50281 582 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ARHGAP4P98171 946 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 BMS1Q14692 1282 aaKnown RBP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 Q4G0T1 1027 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 MIIPQ5JXC2 388 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 BRICD5Q6PL45 260 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 USP17L6PQ6QN14 398 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 BTNL9Q6UXG8 535 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 ZNF662Q6ZS27 426 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 RSRC2Q7L4I2 434 aaKnown RBP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KCNK18Q7Z418 384 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CCDC84Q86UT8 332 aaPredicted RBP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GPBP1Q86WP2 473 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 CSRNP1Q96S65 589 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PHOX2BQ99453 314 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TDRD3Q9H7E2 651 aaKnown RBP10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
RAB3GAP1-205ENST00000489858 KIF13BQ9NQT8 1826 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 EIF3CLB5ME19 914 aaKnown RBP10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 GNA14O95837 355 aa10.59□□□□□ -0.71
RAB3GAP1-205ENST00000489858 AVPP01185 164 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms