RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 TMCO5BA8MYB1 307 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 WDR46O15213 610 aaKnown RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 SPTLC2O15270 562 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 ZSCAN12O43309 604 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 EPHX2P34913 555 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 SNCBQ16143 134 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 ACCSLQ4AC99 568 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 MYLK4Q86YV6 388 aaPredicted RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 PDILTQ8N807 584 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 SRPRBQ9Y5M8 271 aaKnown RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 MEIS2O14770 477 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 PPFIA2O75334 1257 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 CMA1P23946 247 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 SLC16A2P36021 539 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 GGCXP38435 758 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 SLC1A4P43007 532 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 PDCD2Q16342 344 aaPredicted RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 CDC37Q16543 378 aaPredicted RBP10.84□□□□□ -0.67
NOD1-208ENST00000489614 SLC5A9Q2M3M2 681 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 CAPS2Q9BXY5 557 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 LZTFL1Q9NQ48 299 aa10.84□□□□□ -0.67
NOD1-208ENST00000489614 UNCXA6NJT0 531 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 ZEB2O60315 1214 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 CUTAO60888 179 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 PRPF6O94906 941 aaKnown RBP10.83□□□□□ -0.68
NOD1-208ENST00000489614 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 CAPRIN2Q6IMN6 1127 aaKnown RBP10.83□□□□□ -0.68
NOD1-208ENST00000489614 KIAA1328Q86T90 577 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 RMI1Q9H9A7 625 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 SLC40A1Q9NP59 571 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 ANO10Q9NW15 660 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 MYO6Q9UM54 1294 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 GOLGA6CA6NDK9 693 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 ADM5C9JUS6 153 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 MEFVO15553 781 aaPredicted RBP10.83□□□□□ -0.68
NOD1-208ENST00000489614 GOLGA6DP0CG33 693 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 SAFBQ15424 915 aaKnown RBP eCLIP10.83□□□□□ -0.68
NOD1-208ENST00000489614 POTEEQ6S8J3 1075 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 GOLGA6AQ9NYA3 693 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 CYP3A7-CYP3A51PA0A087WV96 503 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 ZMYND10O75800 440 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 CYP3A7P24462 503 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 NLRP5P59047 1200 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 EZH1Q92800 747 aaPredicted RBP10.83□□□□□ -0.68
NOD1-208ENST00000489614 RSRC1Q96IZ7 334 aaKnown RBP10.83□□□□□ -0.68
NOD1-208ENST00000489614 TSGA10Q9BZW7 698 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 MAF1Q9H063 256 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 GBP3Q9H0R5 595 aa10.83□□□□□ -0.68
NOD1-208ENST00000489614 SMCO2A6NFE2 343 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 ATP2C2O75185 946 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 FSBPO95073 299 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 STAT2P52630 851 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 BACE1P56817 501 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 GRIN1Q05586 938 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 GNPTABQ3T906 1256 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 LDLRAD1Q5T700 205 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 TOGARAM2Q6ZUX3 1019 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 HEATR3Q7Z4Q2 680 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 ARL10Q8N8L6 244 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 COA7Q96BR5 231 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 CDCA5Q96FF9 252 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 CCDC114Q96M63 670 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 RPTORQ8N122 1335 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 DOCK5Q9H7D0 1870 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 TPD52L2O43399 206 aaKnown RBP10.82□□□□□ -0.68
NOD1-208ENST00000489614 ATP1A3P13637 1013 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 PRPHP41219 470 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 SUPT20HL1Q3ZLR7 823 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 HSP90AA4PQ58FG1 418 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 ARL6IP4Q66PJ3 421 aaKnown RBP10.82□□□□□ -0.68
NOD1-208ENST00000489614 KRT25Q7Z3Z0 450 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 CCDC84Q86UT8 332 aaPredicted RBP10.82□□□□□ -0.68
NOD1-208ENST00000489614 PARP9Q8IXQ6 854 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 CCDC13Q8IYE1 715 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 B4GALNT2Q8NHY0 566 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 MTMR9Q96QG7 549 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 RAB21Q9UL25 225 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 MGAMO43451 1857 aa10.82□□□□□ -0.68
NOD1-208ENST00000489614 TMEM232C9JQI7 657 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 ATP2A1O14983 1001 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 VCAM1P19320 739 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 GNA11P29992 359 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 MDM2Q00987 491 aaPredicted RBP10.81□□□□□ -0.68
NOD1-208ENST00000489614 IFT88Q13099 833 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 TTC38Q5R3I4 469 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 CDCA2Q69YH5 1023 aaPredicted RBP10.81□□□□□ -0.68
NOD1-208ENST00000489614 TLDC1Q6P9B6 456 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 MOXD1Q6UVY6 613 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 DLK2Q6UY11 383 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
NOD1-208ENST00000489614 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
NOD1-208ENST00000489614 SDF4Q9BRK5 362 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms