RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 NFASCO94856 1347 aa24.23■■□□□ 1.47
SMC4-221ENST00000489573 RPN1P04843 607 aaKnown RBP24.22■■□□□ 1.47
SMC4-221ENST00000489573 MUTP22033 750 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 TM4SF4P48230 202 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 GRM1Q13255 1194 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 DHX8Q14562 1220 aaKnown RBP24.22■■□□□ 1.47
SMC4-221ENST00000489573 CYP4F22Q6NT55 531 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 TRIM9Q9C026 710 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 CBX8Q9HC52 389 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 ZFYVE28Q9HCC9 887 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 RGL1Q9NZL6 768 aa24.22■■□□□ 1.47
SMC4-221ENST00000489573 E9PMD0 336 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 TLR2O60603 784 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 ZNF792Q3KQV3 632 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 PLEKHH3Q7Z736 793 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 MORC4Q8TE76 937 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 RMND1Q9NWS8 449 aa24.21■■□□□ 1.47
SMC4-221ENST00000489573 ASB14A6NK59 587 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 PLA2G4BP0C869 781 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 JAK3P52333 1124 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 CTTNQ14247 550 aaKnown RBP24.2■■□□□ 1.47
SMC4-221ENST00000489573 GRB14Q14449 540 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 SEPT14Q6ZU15 432 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 ZIC5Q96T25 663 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 DNM3Q9UQ16 869 aa24.2■■□□□ 1.47
SMC4-221ENST00000489573 WDR64B1ANS9 1081 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 SLITRK3O94933 977 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 BMP6P22004 513 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 SFNP31947 248 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 NOGQ13253 232 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 ZNF746Q6NUN9 644 aaPredicted RBP24.2■■□□□ 1.46
SMC4-221ENST00000489573 C17orf99Q6UX52 265 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 TPH2Q8IWU9 490 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 RDM1Q8NG50 284 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 SENP7Q9BQF6 1050 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 CREBZFQ9NS37 354 aa24.2■■□□□ 1.46
SMC4-221ENST00000489573 MYMKA6NI61 221 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 RASSF10A6NK89 507 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 COBLO75128 1261 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 CCNE2O96020 404 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 XRCC6P12956 609 aaKnown RBP eCLIP24.19■■□□□ 1.46
SMC4-221ENST00000489573 ASIC1P78348 528 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 KCNB1Q14721 858 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 UVSSAQ2YD98 709 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 MLKLQ8NB16 471 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 JPH1Q9HDC5 661 aaPredicted RBP24.19■■□□□ 1.46
SMC4-221ENST00000489573 DACH1Q9UI36 760 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 SAMM50Q9Y512 469 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 KIAA1217Q5T5P2 1943 aa24.19■■□□□ 1.46
SMC4-221ENST00000489573 ZNFX1Q9P2E3 1918 aaKnown RBP24.19■■□□□ 1.46
SMC4-221ENST00000489573 SLC15A5A6NIM6 579 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 KLRC4O43908 158 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 SSBP05455 408 aaKnown RBP eCLIP24.18■■□□□ 1.469e-17■■■■■ 55.5
SMC4-221ENST00000489573 P4HBP07237 508 aaKnown RBP24.18■■□□□ 1.46
SMC4-221ENST00000489573 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
SMC4-221ENST00000489573 CNNM4Q6P4Q7 775 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 ZNF467Q7Z7K2 595 aaPredicted RBP24.18■■□□□ 1.46
SMC4-221ENST00000489573 LUZP1Q86V48 1076 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 DNAJC5GQ8N7S2 189 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 CCDC47Q96A33 483 aaKnown RBP24.18■■□□□ 1.46
SMC4-221ENST00000489573 BPIFA3Q9BQP9 254 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 LXNQ9BS40 222 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 ZNF236Q9UL36 1845 aa24.18■■□□□ 1.46
SMC4-221ENST00000489573 EYA4O95677 639 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 SLC12A3P55017 1021 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 PSMC6P62333 389 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 CRHR2Q13324 411 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 DEFB115Q30KQ5 88 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 KMT5BQ4FZB7 885 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 SMAP1Q8IYB5 467 aaPredicted RBP24.17■■□□□ 1.46
SMC4-221ENST00000489573 BANK1Q8NDB2 785 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 SLC9A2Q9UBY0 812 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 PCNTO95613 3336 aa24.17■■□□□ 1.46
SMC4-221ENST00000489573 IQCB1Q15051 598 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 ARMCX2Q7L311 632 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 EEPD1Q7L9B9 569 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 SYT2Q8N9I0 419 aaPredicted RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 CAPNS2Q96L46 248 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 DIS3Q9Y2L1 958 aaKnown RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 CA12O43570 354 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 ALDH1A1P00352 501 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 TGFB3P10600 412 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 UBA1P22314 1058 aaKnown RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 SP2Q02086 613 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 KCNV1Q6PIU1 500 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 DPP9Q86TI2 863 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 GPBP1Q86WP2 473 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 GIMAP8Q8ND71 665 aaPredicted RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 DDX12PQ92771 950 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 NACC1Q96RE7 527 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 ZSWIM4Q9H7M6 989 aa24.16■■□□□ 1.46
SMC4-221ENST00000489573 BMP2KQ9NSY1 1161 aaPredicted RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 WRAP73Q9P2S5 460 aaPredicted RBP24.16■■□□□ 1.46
SMC4-221ENST00000489573 PVALEFA0A1B0GWK0 134 aa24.15■■□□□ 1.46
SMC4-221ENST00000489573 RHOBTB3O94955 611 aa24.15■■□□□ 1.46
SMC4-221ENST00000489573 CYP11B2P19099 503 aa24.15■■□□□ 1.46
SMC4-221ENST00000489573 QARSP47897 775 aaKnown RBP24.15■■□□□ 1.46
SMC4-221ENST00000489573 ZNF658Q5TYW1 1059 aaPredicted RBP24.15■■□□□ 1.46
SMC4-221ENST00000489573 UNC13DQ70J99 1090 aa24.15■■□□□ 1.46
SMC4-221ENST00000489573 DYMQ7RTS9 669 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms