RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 SCN10AQ9Y5Y9 1956 aa8.92□□□□□ -0.98
SSR1-210ENST00000489567 H0YGN5 161 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 RBAK-RBAKDNI3L0D1 243 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 NOP56O00567 594 aaKnown RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 KPNA6O60684 536 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 F2P00734 622 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 LGALS2P05162 132 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 SYN1P17600 705 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 CHMP4BP1P59074 171 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 SETQ01105 290 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 Q4G0T1 1027 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 ANKRD33Q7Z3H0 272 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 FAM126BQ8IXS8 530 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 GIMAP8Q8ND71 665 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 PCYT2Q99447 389 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 BRMS1Q9HCU9 246 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 JPH1Q9HDC5 661 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 SLC9A2Q9UBY0 812 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 ZMYND8Q9ULU4 1186 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 HAS3O00219 553 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 B4GALT4O60513 344 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 CCNT1O60563 726 aaKnown RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 CDK11BP21127 795 aaKnown RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 ITGB8P26012 769 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 TCF7P36402 384 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 FXR2P51116 673 aaKnown RBP eCLIP8.91□□□□□ -0.981e-6■■■□□ 18.3
SSR1-210ENST00000489567 ACTR2P61160 394 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 HIC1Q14526 733 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 KIAA0753Q2KHM9 967 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 GLIPR1L2Q4G1C9 344 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 UTP14CQ5TAP6 766 aaKnown RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 MOXD1Q6UVY6 613 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 ETNPPLQ8TBG4 499 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 SDF4Q9BRK5 362 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 TRPV6Q9H1D0 765 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 FOXP1Q9H334 677 aaPredicted RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
SSR1-210ENST00000489567 DDX25Q9UHL0 483 aaKnown RBP8.91□□□□□ -0.98
SSR1-210ENST00000489567 TRIM43BA6NCK2 446 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 H3BRB1 525 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 ATG7O95352 703 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 CD4P01730 458 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 U2AF2P26368 475 aaKnown RBP eCLIP8.9□□□□□ -0.982e-7■■□□□ 13.1
SSR1-210ENST00000489567 PSEN2P49810 448 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 MFSD10Q14728 455 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 SAFBQ15424 915 aaKnown RBP eCLIP8.9□□□□□ -0.98
SSR1-210ENST00000489567 PPP4R3AQ6IN85 833 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 SEPT1Q8WYJ6 367 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 HAS1Q92839 578 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 SLC5A5Q92911 643 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 TRIM43Q96BQ3 446 aaPredicted RBP8.9□□□□□ -0.98
SSR1-210ENST00000489567 CTAGE1Q96RT6 745 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 RNPEPQ9H4A4 650 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
SSR1-210ENST00000489567 KCNMB3Q9NPA1 279 aa8.9□□□□□ -0.98
SSR1-210ENST00000489567 TRMT13Q9NUP7 481 aaKnown RBP8.9□□□□□ -0.98
SSR1-210ENST00000489567 PSMD10O75832 226 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 CLTBP09497 229 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 ATP2B1P20020 1258 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 ZNF200P98182 395 aaPredicted RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 FAM47CQ5HY64 1035 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 LARP1BQ659C4 914 aaKnown RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 NFRKBQ6P4R8 1299 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 ABHD15Q6UXT9 468 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 NOSTRINQ8IVI9 506 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 INTS4Q96HW7 963 aaKnown RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 TOX2Q96NM4 488 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 TBC1D22BQ9NU19 505 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 HDAC6Q9UBN7 1215 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 IGKV6D-21A0A0A0MT36 114 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 LGR5O75473 907 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 GCFC2P16383 781 aaKnown RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 MARK3P27448 753 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 TOB1P50616 345 aaPredicted RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 LRCH2Q5VUJ6 765 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 MCTP1Q6DN14 999 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 GDF6Q6KF10 455 aaPredicted RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 B3GNT9Q6UX72 402 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 CCDC60Q8IWA6 550 aaPredicted RBP8.89□□□□□ -0.99
SSR1-210ENST00000489567 HSCBQ8IWL3 235 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 RIT2Q99578 217 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 TMEM60Q9H2L4 133 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 UNC45AQ9H3U1 944 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 GTF2IRD1Q9UHL9 959 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 TBX21Q9UL17 535 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 KIF3AQ9Y496 699 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 NR2E3Q9Y5X4 410 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 MROH7Q68CQ1 1323 aa8.89□□□□□ -0.99
SSR1-210ENST00000489567 PDE4DIPQ5VU43 2346 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 H3BQV1 296 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 CHMP2AO43633 222 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 GAS7O60861 476 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 SUPT20HL2P0C7V6 817 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 SMIM10L2AP0DMW4 78 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 SMIM10L2BP0DMW5 78 aa8.88□□□□□ -0.99
SSR1-210ENST00000489567 CYP2C9P11712 490 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms