RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 RNPC3Q96LT9 517 aaKnown RBP15.2■□□□□ 0.02
CCL28-202ENST00000489442 ZSCAN31Q96LW9 406 aaPredicted RBP15.2■□□□□ 0.02
CCL28-202ENST00000489442 UIMC1Q96RL1 719 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 ZNF577Q9BSK1 485 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 IL23AQ9NPF7 189 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 TELO2Q9Y4R8 837 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
CCL28-202ENST00000489442 SZT2Q5T011 3432 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 SCN5AQ14524 2016 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 DDX39AO00148 427 aaKnown RBP15.19■□□□□ 0.02
CCL28-202ENST00000489442 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
CCL28-202ENST00000489442 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 SMIM10L2AP0DMW4 78 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 SMIM10L2BP0DMW5 78 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 ACRP10323 421 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 ITGB3BPQ13352 177 aaPredicted RBP15.19■□□□□ 0.02
CCL28-202ENST00000489442 TRIM29Q14134 588 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCL28-202ENST00000489442 RABEP1Q15276 862 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 PSRC1Q6PGN9 363 aaPredicted RBP15.19■□□□□ 0.02
CCL28-202ENST00000489442 KRT25Q7Z3Z0 450 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
CCL28-202ENST00000489442 CAGE1Q8TC20 777 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 ATP6V0A1Q93050 837 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 KIF2CQ99661 725 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCL28-202ENST00000489442 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 WNT8AQ9H1J5 351 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 SMARCAD1Q9H4L7 1026 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 ERAP1Q9NZ08 941 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
CCL28-202ENST00000489442 IGLV3-22A0A075B6J6 115 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 CCDC194A0A1B0GVG4 234 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 ST18O60284 1047 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 FGBP02675 491 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 MARK3P27448 753 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 CIITAP33076 1130 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 ACTR2P61160 394 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
CCL28-202ENST00000489442 C1QBPQ07021 282 aaKnown RBP15.18■□□□□ 0.02
CCL28-202ENST00000489442 PTK7Q13308 1070 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 CCDC83Q8IWF9 413 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 LRCH3Q96II8 777 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 MTIF3Q9H2K0 278 aaKnown RBP15.18■□□□□ 0.02
CCL28-202ENST00000489442 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 TBC1D22BQ9NU19 505 aa15.18■□□□□ 0.02
CCL28-202ENST00000489442 SOX1O00570 391 aaPredicted RBP15.17■□□□□ 0.02
CCL28-202ENST00000489442 BACH1O14867 736 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 JAK2O60674 1132 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 FDPSP14324 419 aaKnown RBP15.17■□□□□ 0.02
CCL28-202ENST00000489442 TMEM240Q5SV17 173 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 DEFB128Q7Z7B8 93 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 AFAP1L1Q8TED9 768 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 TNPO1Q92973 898 aaKnown RBP15.17■□□□□ 0.02
CCL28-202ENST00000489442 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCL28-202ENST00000489442 SH2B1Q9NRF2 756 aaPredicted RBP15.17■□□□□ 0.02
CCL28-202ENST00000489442 GJB4Q9NTQ9 266 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 EMSYQ7Z589 1322 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 NRCAMQ92823 1304 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 SELPP16109 830 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 RFC2P35250 354 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 KRT2P35908 639 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 STAT5BP51692 787 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 FOSBP53539 338 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 PPFIA1Q13136 1202 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 NPY5RQ15761 445 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 INF2Q27J81 1249 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 C16orf59Q7L2K0 433 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 OTOP2Q7RTS6 562 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 SAMM50Q9Y512 469 aa15.17■□□□□ 0.02
CCL28-202ENST00000489442 TANC1Q9C0D5 1861 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 ZBBXA8MT70 800 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 M0R2N6 131 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 TREHO43280 583 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 LGR5O75473 907 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 PFKMP08237 780 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 CKBP12277 381 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 THPOP40225 353 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 KRT76Q01546 638 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 LETM2Q2VYF4 491 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 MIS18BP1Q6P0N0 1132 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 SERINC5Q86VE9 423 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 TET1Q8NFU7 2136 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
CCL28-202ENST00000489442 CTAGE1Q96RT6 745 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
CCL28-202ENST00000489442 TRPC6Q9Y210 931 aa15.16■□□□□ 0.02
CCL28-202ENST00000489442 WDR81Q562E7 1941 aa15.15■□□□□ 0.02
CCL28-202ENST00000489442 MSH4O15457 936 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms