RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 DEFB123Q8N688 67 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 ATP6V0A1Q93050 837 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 AZI2Q9H6S1 392 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 PKD2L1Q9P0L9 805 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 NRCAMQ92823 1304 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 TRIP12Q14669 1992 aaPredicted RBP27.31■■□□□ 1.96
PTPN18-213ENST00000489215 KAT6AQ92794 2004 aa27.31■■□□□ 1.96
PTPN18-213ENST00000489215 GSTTP1A0A1W2PQM5 241 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 ARP10275 920 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 HOXC8P31273 242 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 CIITAP33076 1130 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 GLG1Q92896 1179 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 CTAGE1Q96RT6 745 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 RNPEPQ9H4A4 650 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 TBC1D22BQ9NU19 505 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 EMSYQ7Z589 1322 aa27.3■■□□□ 1.96
PTPN18-213ENST00000489215 TMEM265A0A087WTH1 108 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 ZNF697Q5TEC3 545 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 LRRC8DQ7L1W4 858 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 SERINC5Q86VE9 423 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 BLIDQ8IZY5 108 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 DAGLBQ8NCG7 672 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 TCEAL9Q9UHQ7 104 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 LAMA3Q16787 3333 aa27.29■■□□□ 1.96
PTPN18-213ENST00000489215 TANC1Q9C0D5 1861 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 FAM86B1E9PN63 330 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 CAND2O75155 1236 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 FAM86B2P0C5J1 330 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 CKBP12277 381 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 OTOP2Q7RTS6 562 aa27.28■■□□□ 1.96
PTPN18-213ENST00000489215 IGLV3-22A0A075B6J6 115 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 IPO5O00410 1097 aaKnown RBP27.27■■□□□ 1.96
PTPN18-213ENST00000489215 LGR5O75473 907 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 SLC26A2P50443 739 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 C8orf34Q49A92 452 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 DEFB128Q7Z7B8 93 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 IL27Q8NEV9 243 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 DHX38Q92620 1227 aaKnown RBP27.27■■□□□ 1.96
PTPN18-213ENST00000489215 ZNF577Q9BSK1 485 aa27.27■■□□□ 1.96
PTPN18-213ENST00000489215 FTOQ9C0B1 505 aaKnown RBP eCLIP27.27■■□□□ 1.96
PTPN18-213ENST00000489215 RPLP2P05387 115 aaKnown RBP27.26■■□□□ 1.95
PTPN18-213ENST00000489215 ACTR2P61160 394 aa27.26■■□□□ 1.95
PTPN18-213ENST00000489215 PLPPR4Q7Z2D5 763 aa27.26■■□□□ 1.95
PTPN18-213ENST00000489215 TRIM50Q86XT4 487 aa27.26■■□□□ 1.95
PTPN18-213ENST00000489215 SLC4A7Q9Y6M7 1214 aa27.26■■□□□ 1.95
PTPN18-213ENST00000489215 BAIAP3O94812 1187 aa27.25■■□□□ 1.95
PTPN18-213ENST00000489215 ATG7O95352 703 aa27.25■■□□□ 1.95
PTPN18-213ENST00000489215 ZNF200P98182 395 aaPredicted RBP27.25■■□□□ 1.95
PTPN18-213ENST00000489215 ITGB3BPQ13352 177 aaPredicted RBP27.25■■□□□ 1.95
PTPN18-213ENST00000489215 RASGRP4Q8TDF6 673 aa27.25■■□□□ 1.95
PTPN18-213ENST00000489215 GTF3C6Q969F1 213 aa27.25■■□□□ 1.95
PTPN18-213ENST00000489215 SETD4Q9NVD3 440 aa27.25■■□□□ 1.95
PTPN18-213ENST00000489215 RRN3P2A6NIE6 340 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 STAT5BP51692 787 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 ME3Q16798 604 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 TRIM71Q2Q1W2 868 aaKnown RBP27.24■■□□□ 1.95
PTPN18-213ENST00000489215 PRR16Q569H4 304 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 FAM160B1Q5W0V3 765 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 KRT25Q7Z3Z0 450 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 MTMR10Q9NXD2 777 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 ORC3Q9UBD5 711 aaPredicted RBP27.24■■□□□ 1.95
PTPN18-213ENST00000489215 TELO2Q9Y4R8 837 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 SCN5AQ14524 2016 aa27.24■■□□□ 1.95
PTPN18-213ENST00000489215 ZBBXA8MT70 800 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 TREHO43280 583 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 THPOP40225 353 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 PPFIA1Q13136 1202 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 RAB30Q15771 203 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 MIS18BP1Q6P0N0 1132 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 TAF2Q6P1X5 1199 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 SMAP1Q8IYB5 467 aaPredicted RBP27.23■■□□□ 1.95
PTPN18-213ENST00000489215 TBCKQ8TEA7 893 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 PHF20Q9BVI0 1012 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 UPF2Q9HAU5 1272 aaKnown RBP27.23■■□□□ 1.95
PTPN18-213ENST00000489215 MSRAQ9UJ68 235 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 LIMCH1Q9UPQ0 1083 aa27.23■■□□□ 1.95
PTPN18-213ENST00000489215 RSPH10B2B2RC85 870 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 M0R2N6 131 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 ADAMTS3O15072 1205 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 EFCAB14O75071 495 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 CXCL10P02778 98 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 RSPH10BP0C881 870 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 ADAM17P78536 824 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 KRT76Q01546 638 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 HIC1Q14526 733 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 NONOQ15233 471 aaKnown RBP eCLIP27.22■■□□□ 1.951e-6■■■■■ 33.2
PTPN18-213ENST00000489215 ZNF618Q5T7W0 954 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 ZNF746Q6NUN9 644 aaPredicted RBP27.22■■□□□ 1.95
PTPN18-213ENST00000489215 MOXD1Q6UVY6 613 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 RSPH3Q86UC2 560 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 PHOSPHO2Q8TCD6 241 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 LMBR1Q8WVP7 490 aa27.22■■□□□ 1.95
PTPN18-213ENST00000489215 CXXC1Q9P0U4 656 aaPredicted RBP27.22■■□□□ 1.95
PTPN18-213ENST00000489215 IGKV6D-21A0A0A0MT36 114 aa27.21■■□□□ 1.95
PTPN18-213ENST00000489215 DHX15O43143 795 aaKnown RBP27.21■■□□□ 1.95
PTPN18-213ENST00000489215 DNAJB2P25686 324 aa27.21■■□□□ 1.95
PTPN18-213ENST00000489215 CNKSR3Q6P9H4 555 aa27.21■■□□□ 1.95
PTPN18-213ENST00000489215 Q7L0L9 218 aa27.21■■□□□ 1.95
PTPN18-213ENST00000489215 VWCEQ96DN2 955 aa27.21■■□□□ 1.95
PTPN18-213ENST00000489215 AIFM3Q96NN9 605 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms