RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 EPHB4P54760 987 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 TRIM29Q14134 588 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 PRR16Q569H4 304 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 ZNF365Q70YC5 407 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 KRT25Q7Z3Z0 450 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 IL27Q8NEV9 243 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 CRYGNQ8WXF5 182 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 ATP6V0A1Q93050 837 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 SCLYQ96I15 445 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.19
BRCA1-218ENST00000489037 WNT8AQ9H1J5 351 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 BRMS1Q9HCU9 246 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 TBC1D22BQ9NU19 505 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 SCN5AQ14524 2016 aa16.22■□□□□ 0.19
BRCA1-218ENST00000489037 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 DDX39AO00148 427 aaKnown RBP16.21■□□□□ 0.19
BRCA1-218ENST00000489037 IPO5O00410 1097 aaKnown RBP16.21■□□□□ 0.19
BRCA1-218ENST00000489037 ADAMTS3O15072 1205 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 PARNO95453 639 aaKnown RBP16.21■□□□□ 0.19
BRCA1-218ENST00000489037 LARGE1O95461 756 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 CTDNEP1O95476 244 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 ACTN1P12814 892 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 CIITAP33076 1130 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 ACTR2P61160 394 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 NONOQ15233 471 aaKnown RBP eCLIP16.21■□□□□ 0.19
BRCA1-218ENST00000489037 RABEP1Q15276 862 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 TMEM240Q5SV17 173 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 GPR153Q6NV75 609 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 TRIM50Q86XT4 487 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 TBCKQ8TEA7 893 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 PHF20Q9BVI0 1012 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 RNPEPQ9H4A4 650 aa16.21■□□□□ 0.19
BRCA1-218ENST00000489037 RANBP2P49792 3224 aaKnown RBP16.21■□□□□ 0.18
BRCA1-218ENST00000489037 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 IGLV3-22A0A075B6J6 115 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-218ENST00000489037 ST18O60284 1047 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 IQCF3P0C7M6 154 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 SELPP16109 830 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 ITGB3BPQ13352 177 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-218ENST00000489037 FAM160B1Q5W0V3 765 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 DEFB128Q7Z7B8 93 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 NSUN7Q8NE18 718 aaKnown RBP16.2■□□□□ 0.18
BRCA1-218ENST00000489037 FTOQ9C0B1 505 aaKnown RBP eCLIP16.2■□□□□ 0.18
BRCA1-218ENST00000489037 SH2B1Q9NRF2 756 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-218ENST00000489037 TELO2Q9Y4R8 837 aa16.2■□□□□ 0.18
BRCA1-218ENST00000489037 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 NRCAMQ92823 1304 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-218ENST00000489037 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-218ENST00000489037 BACH1O14867 736 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 LGR5O75473 907 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 MARK3P27448 753 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 STAT5BP51692 787 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-218ENST00000489037 MIS18BP1Q6P0N0 1132 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 LRRC8DQ7L1W4 858 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 C16orf59Q7L2K0 433 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 SETD4Q9NVD3 440 aa16.19■□□□□ 0.18
BRCA1-218ENST00000489037 WDR81Q562E7 1941 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 TREHO43280 583 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 SLC34A2O95436 690 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 CKBP12277 381 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 KRT2P35908 639 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 SLC26A2P50443 739 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
BRCA1-218ENST00000489037 KRT76Q01546 638 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 RBL2Q08999 1139 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 PPFIA1Q13136 1202 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
BRCA1-218ENST00000489037 OTOP2Q7RTS6 562 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 PLPPR4Q7Z2D5 763 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 SERINC5Q86VE9 423 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 CCDC83Q8IWF9 413 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 HERVK_113Q902F9 699 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 UIMC1Q96RL1 719 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
BRCA1-218ENST00000489037 LLPHQ9BRT6 129 aaKnown RBP16.18■□□□□ 0.18
BRCA1-218ENST00000489037 TRPC6Q9Y210 931 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 TET1Q8NFU7 2136 aa16.18■□□□□ 0.18
BRCA1-218ENST00000489037 RRN3P2A6NIE6 340 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 ZBBXA8MT70 800 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 M0R2N6 131 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 ATG7O95352 703 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 FDPSP14324 419 aaKnown RBP16.17■□□□□ 0.18
BRCA1-218ENST00000489037 THPOP40225 353 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 INF2Q27J81 1249 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 MOXD1Q6UVY6 613 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 RSPH3Q86UC2 560 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 SMAP1Q8IYB5 467 aaPredicted RBP16.17■□□□□ 0.18
BRCA1-218ENST00000489037 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
BRCA1-218ENST00000489037 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 KIF2CQ99661 725 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 TEKT3Q9BXF9 490 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 SAMM50Q9Y512 469 aa16.17■□□□□ 0.18
BRCA1-218ENST00000489037 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms