RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 SPATA33Q96N06 139 aa13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 POLR3EQ9NVU0 708 aa13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 SLC9A2Q9UBY0 812 aa13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 KIAA0100Q14667 2235 aaKnown RBP13.24□□□□□ -0.29
CEACAM1-212ENST00000488639 KBTBD13C9JR72 458 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 MARCH6O60337 910 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 PSMD10O75832 226 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 MMP3P08254 477 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 MCM7P33993 719 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 JAK3P52333 1124 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 LRRC41Q15345 812 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 GNASQ5JWF2 1037 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 SEPT1Q8WYJ6 367 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 ZNF396Q96N95 335 aaPredicted RBP13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 MTMR9Q96QG7 549 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 RAB34Q9BZG1 259 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 WDR81Q562E7 1941 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 BRCA2P51587 3418 aa13.23□□□□□ -0.29
CEACAM1-212ENST00000488639 ELP1O95163 1332 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 CTAGE5O15320 804 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 ATG7O95352 703 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 PGK1P00558 417 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 OR52Z1P0C646 297 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 ATP2B1P20020 1258 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 PPP2R5CQ13362 524 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 ZNF174Q15697 407 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 CCSAPQ6IQ19 270 aaPredicted RBP13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 HAS1Q92839 578 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 COPS5Q92905 334 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 GPR20Q99678 358 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 KATNAL1Q9BW62 490 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 CFAP45Q9UL16 551 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 PCDHA12Q9UN75 941 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 PCDHB6Q9Y5E3 794 aa13.22□□□□□ -0.29
CEACAM1-212ENST00000488639 MYH9P35579 1960 aaKnown RBP13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 DNAH12Q6ZR08 3092 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 EMSYQ7Z589 1322 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 SLC26A2P50443 739 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 ACTR2P61160 394 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 ATP2C1P98194 919 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 PTGDRQ13258 359 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 KCNA10Q16322 511 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 TMEM266Q2M3C6 531 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 C4orf32Q8N8J7 132 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 LENG1Q96BZ8 264 aaPredicted RBP13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 PCDHA10Q9Y5I2 948 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
CEACAM1-212ENST00000488639 WNT7AO00755 349 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 ASGR1P07306 291 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 PSAPP07602 524 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 NASPP49321 788 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 ACLYP53396 1101 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 PKP1Q13835 747 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 PDIA5Q14554 519 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 TMEM63BQ5T3F8 832 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 MIS18BP1Q6P0N0 1132 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 NEK9Q8TD19 979 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 MTG1Q9BT17 334 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 AZI2Q9H6S1 392 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 TTC12Q9H892 705 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 PKD2L1Q9P0L9 805 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 VAV3Q9UKW4 847 aa13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
CEACAM1-212ENST00000488639 IGKV6D-21A0A0A0MT36 114 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 DKC1O60832 514 aaKnown RBP eCLIP13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 LGR5O75473 907 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 YEATS4O95619 227 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 F2P00734 622 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 SUPT20HL2P0C7V6 817 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 PURAQ00577 322 aaKnown RBP13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 FAM160B1Q5W0V3 765 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 ABHD15Q6UXT9 468 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 DTHD1Q6ZMT9 781 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 PLPPR4Q7Z2D5 763 aa13.19□□□□□ -0.3
CEACAM1-212ENST00000488639 NECAB2Q7Z6G3 386 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms