RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 COLQQ9Y215 455 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-207ENST00000488591 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 GSTTP1A0A1W2PQM5 241 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 CYP3A7P24462 503 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 BMP8BP34820 402 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 Q4G0T1 1027 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
CXCL12-207ENST00000488591 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 GLG1Q92896 1179 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 BADQ92934 168 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 UBE2OQ9C0C9 1292 aaKnown RBP17.07■□□□□ 0.32
CXCL12-207ENST00000488591 HIPK3Q9H422 1215 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 SMARCAD1Q9H4L7 1026 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 TRMT13Q9NUP7 481 aaKnown RBP17.07■□□□□ 0.32
CXCL12-207ENST00000488591 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
CXCL12-207ENST00000488591 BTBD18B2RXH4 712 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 DDX39AO00148 427 aaKnown RBP17.06■□□□□ 0.32
CXCL12-207ENST00000488591 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
CXCL12-207ENST00000488591 GCFC2P16383 781 aaKnown RBP17.06■□□□□ 0.32
CXCL12-207ENST00000488591 ACTR2P61160 394 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 PTGISQ16647 500 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 TNPO1Q92973 898 aaKnown RBP17.06■□□□□ 0.32
CXCL12-207ENST00000488591 ERAP1Q9NZ08 941 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 GTF2IRD1Q9UHL9 959 aa17.06■□□□□ 0.32
CXCL12-207ENST00000488591 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
CXCL12-207ENST00000488591 MSH4O15457 936 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 DHX15O43143 795 aaKnown RBP17.05■□□□□ 0.32
CXCL12-207ENST00000488591 EDIL3O43854 480 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 TDP2O95551 362 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 GNAT1P11488 350 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 KRT76Q01546 638 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 NR5A1Q13285 461 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
CXCL12-207ENST00000488591 GDF6Q6KF10 455 aaPredicted RBP17.05■□□□□ 0.32
CXCL12-207ENST00000488591 MFSD5Q6N075 450 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 MIS18BP1Q6P0N0 1132 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 CCDC155Q8N6L0 562 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 LENG9Q96B70 501 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 UIMC1Q96RL1 719 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 RIT2Q99578 217 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 PPP1R12CQ9BZL4 782 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
CXCL12-207ENST00000488591 TELO2Q9Y4R8 837 aa17.05■□□□□ 0.32
CXCL12-207ENST00000488591 EMSYQ7Z589 1322 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 A0A1W2PPC1 479 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 C17orf102A2RUQ5 167 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 BACH1O14867 736 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 MARCH6O60337 910 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 CCNT1O60563 726 aaKnown RBP17.04■□□□□ 0.32
CXCL12-207ENST00000488591 GAS7O60861 476 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 LGR5O75473 907 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 ATG7O95352 703 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 SMIM10L2AP0DMW4 78 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 SMIM10L2BP0DMW5 78 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 CYP2C9P11712 490 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 ITGB8P26012 769 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 STAT5BP51692 787 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 FPGSQ05932 587 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 BFSP2Q13515 415 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 LRCH2Q5VUJ6 765 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 FAM160B1Q5W0V3 765 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 PPP4R3AQ6IN85 833 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 ZNF746Q6NUN9 644 aaPredicted RBP17.04■□□□□ 0.32
CXCL12-207ENST00000488591 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 SMAP1Q8IYB5 467 aaPredicted RBP17.04■□□□□ 0.32
CXCL12-207ENST00000488591 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 TNFRSF25Q93038 417 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 NOC4LQ9BVI4 516 aaKnown RBP17.04■□□□□ 0.32
CXCL12-207ENST00000488591 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 SAMM50Q9Y512 469 aa17.04■□□□□ 0.32
CXCL12-207ENST00000488591 LTBP2Q14767 1821 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 CCNE2O96020 404 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 PSAPP07602 524 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 KCNA4P22459 653 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 CYP2C18P33260 490 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 PLPPR4Q7Z2D5 763 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 SLC5A5Q92911 643 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
CXCL12-207ENST00000488591 PRO3102Q9H379 93 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
CXCL12-207ENST00000488591 NRCAMQ92823 1304 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 BAG4O95429 457 aaKnown RBP17.02■□□□□ 0.32
CXCL12-207ENST00000488591 MARK3P27448 753 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 SLC26A2P50443 739 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 PTK7Q13308 1070 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 PPIGQ13427 754 aaKnown RBP eCLIP17.02■□□□□ 0.32
CXCL12-207ENST00000488591 EARS2Q5JPH6 523 aaKnown RBP17.02■□□□□ 0.32
CXCL12-207ENST00000488591 ABHD15Q6UXT9 468 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 CAGE1Q8TC20 777 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 ATP6V0A1Q93050 837 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 FAM20AQ96MK3 541 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 RNPEPQ9H4A4 650 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
CXCL12-207ENST00000488591 PCDHA10Q9Y5I2 948 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms