RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MTMR1Q13613 665 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 SERINC5Q86VE9 423 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 CYP2W1Q8TAV3 490 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 BRF1Q92994 677 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 OSBPL7Q9BZF2 842 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 TMEM260Q9NX78 707 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 ZNF215Q9UL58 517 aaPredicted RBP12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 SNX14Q9Y5W7 946 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 UBIAD1Q9Y5Z9 338 aa12.95□□□□□ -0.34
NIPAL3-207ENST00000488155 REV3LO60673 3130 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 GSTTP1A0A1W2PQM5 241 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 SMCO2A6NFE2 343 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 EPOPA6NHQ4 379 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 RSPH10B2B2RC85 870 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 STXBP3O00186 592 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 PARNO95453 639 aaKnown RBP12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 RSPH10BP0C881 870 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 HSPA4P34932 840 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 METAP2P50579 478 aaKnown RBP eCLIP12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 ADCY7P51828 1080 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 DBF4BQ8NFT6 615 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 LMBR1Q8WVP7 490 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 UIMC1Q96RL1 719 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 EHMT1Q9H9B1 1298 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 RIC8AQ9NPQ8 531 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 JADE2Q9NQC1 790 aa12.94□□□□□ -0.34
NIPAL3-207ENST00000488155 TTC3P53804 2025 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 LGR5O75473 907 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 HMGB1P09429 215 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 ARP10275 920 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 TAP1Q03518 808 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 IKBKEQ14164 716 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 JAKMIP3Q5VZ66 844 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 KRT40Q6A162 431 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 GIMAP8Q8ND71 665 aaPredicted RBP12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 SEPT1Q8WYJ6 367 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 GLG1Q92896 1179 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 KCNB2Q92953 911 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 ANO3Q9BYT9 981 aa12.93□□□□□ -0.34
NIPAL3-207ENST00000488155 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 DDX39AO00148 427 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 ADAMTS3O15072 1205 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 NEFLP07196 543 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 GNAT1P11488 350 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 HOXC8P31273 242 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 ZNF76P36508 570 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 IGBP1P78318 339 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 MYOCDQ8IZQ8 938 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 ZBTB10Q96DT7 871 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 MXRA8Q9BRK3 442 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 BARHL2Q9NY43 387 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 MTUS1Q9ULD2 1270 aa12.92□□□□□ -0.34
NIPAL3-207ENST00000488155 FOSP01100 380 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 SCG2P13521 617 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 RPS6KB1P23443 525 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 CCT2P78371 535 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 PFKFB3Q16875 520 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 PPP1R18Q6NYC8 613 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 PHKBQ93100 1093 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 LARP6Q9BRS8 491 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 JPH1Q9HDC5 661 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 SLC9A2Q9UBY0 812 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 ATG2AQ2TAZ0 1938 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 TRANK1O15050 2925 aa12.91□□□□□ -0.34
NIPAL3-207ENST00000488155 EMSYQ7Z589 1322 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 SPTBN5Q9NRC6 3674 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 CCDC196A0A1B0GTZ2 297 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 UPP2O95045 317 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 REC8O95072 547 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 GJB5O95377 273 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 ADAM17P78536 824 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 GRIK4Q16099 956 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 CEP55Q53EZ4 464 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 PLEKHG4Q58EX7 1191 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 GDPD5Q8WTR4 605 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 SEPT8Q92599 483 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 PCYT2Q99447 389 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 SMARCAD1Q9H4L7 1026 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 NCOA5Q9HCD5 579 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 ERAP1Q9NZ08 941 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 RALGAPA2Q2PPJ7 1873 aa12.9□□□□□ -0.34
NIPAL3-207ENST00000488155 NRCAMQ92823 1304 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 hCG_1984214I3L0E3 225 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 MAFGO15525 162 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 EFCAB14O75071 495 aa12.89□□□□□ -0.35
NIPAL3-207ENST00000488155 CHRNA1P02708 482 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms