RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SPC25Q9HBM1 224 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 SAMM50Q9Y512 469 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 TRIM17Q9Y577 477 aa12.4□□□□□ -0.42
HDLBP-242ENST00000488013 DDX49Q9Y6V7 483 aaKnown RBP12.4□□□□□ -0.42
HDLBP-242ENST00000488013 ZNF236Q9UL36 1845 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 ATP9AO75110 1047 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-242ENST00000488013 GGPS1O95749 300 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
HDLBP-242ENST00000488013 XRCC6P12956 609 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDLBP-242ENST00000488013 CYP2C19P33261 490 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 SLC26A2P50443 739 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 TNFAIP2Q03169 654 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 SEMA3FQ13275 785 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 KLHL40Q2TBA0 621 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 NCAPH2Q6IBW4 605 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 CABP7Q86V35 215 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 ELOA2Q8IYF1 753 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-242ENST00000488013 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 SEPT1Q8WYJ6 367 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 ZSWIM4Q9H7M6 989 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 STK17AQ9UEE5 414 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
HDLBP-242ENST00000488013 CTAGE5O15320 804 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 SEPT4O43236 478 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 KPNA6O60684 536 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 PPFIA4O75335 1185 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 LYPLA2O95372 231 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 MYL1P05976 194 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 ZNF865P0CJ78 1059 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 PFKFB1P16118 471 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 QARSP47897 775 aaKnown RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 NUBP1P53384 320 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 ACTR2P61160 394 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 PSMC5P62195 406 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 AMPD3Q01432 767 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 CCL14Q16627 93 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 CCDC144BQ3MJ40 725 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 HYIQ5T013 277 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 TRIB2Q92519 343 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 ZFP91Q96JP5 570 aaPredicted RBP12.38□□□□□ -0.43
HDLBP-242ENST00000488013 SPATA33Q96N06 139 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 NACC1Q96RE7 527 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 HSD17B14Q9BPX1 270 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 UNC45AQ9H3U1 944 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 AZI2Q9H6S1 392 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 FLRT1Q9NZU1 646 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 PKD2L1Q9P0L9 805 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 DNM3Q9UQ16 869 aa12.38□□□□□ -0.43
HDLBP-242ENST00000488013 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 POTEMA6NI47 508 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 CHMP2AO43633 222 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 ZEB2O60315 1214 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 GADD45BO75293 160 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-242ENST00000488013 ATG7O95352 703 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 RARBP10826 455 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 CYBAP13498 195 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 CAPN2P17655 700 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 GRK4P32298 578 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 ADCYAP1R1P41586 468 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 STAT6P42226 847 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 CPT1AP50416 773 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 NDUFA8P51970 172 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 SP2Q02086 613 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 LY6KQ17RY6 165 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 MAP3K21Q5TCX8 1036 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 OTUD6AQ7L8S5 288 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
HDLBP-242ENST00000488013 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
HDLBP-242ENST00000488013 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-242ENST00000488013 PDGFCQ9NRA1 345 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 PTPN22Q9Y2R2 807 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
HDLBP-242ENST00000488013 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
HDLBP-242ENST00000488013 DDX39AO00148 427 aaKnown RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 BACH1O14867 736 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 POLR2DO15514 142 aaKnown RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 TRAK2O60296 914 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 ZNF202O95125 648 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 CCNE2O96020 404 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 HSPA8P11142 646 aaKnown RBP12.36□□□□□ -0.43
HDLBP-242ENST00000488013 SMPD1P17405 629 aa12.36□□□□□ -0.43
HDLBP-242ENST00000488013 GRIN1Q05586 938 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms