RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 SRGAP3O43295 1099 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 BUB1BO60566 1050 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 PPP1R11O60927 126 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 ZBTB7AO95365 584 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 INHBBP09529 407 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 PAMP19021 973 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 ETFBP38117 255 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 AFF3P51826 1226 aaKnown RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 PRR5P85299 388 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 VMACQ2NL98 169 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 TMEM151BQ8IW70 566 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 LZTR1Q8N653 840 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 DACT3Q96B18 629 aaPredicted RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 GPRC5CQ9NQ84 441 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 ACTR10Q9NZ32 417 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 CLEC1BQ9P126 229 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 GULP1Q9UBP9 304 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 PHRF1Q9P1Y6 1649 aaKnown RBP6.96□□□□□ -1.3
BRCA1-217ENST00000487825 WNK3Q9BYP7 1800 aa6.96□□□□□ -1.3
BRCA1-217ENST00000487825 B2RBV5 119 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 NAT2P11245 290 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 RBM25P49756 843 aaKnown RBP6.95□□□□□ -1.3
BRCA1-217ENST00000487825 SCRN1Q12765 414 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 TTLL10Q6ZVT0 673 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 PWWP2AQ96N64 755 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 NRXN1Q9ULB1 1477 aa6.95□□□□□ -1.3
BRCA1-217ENST00000487825 ATP10DQ9P241 1426 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 PLS3P13797 630 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 LIMS1P48059 325 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 ZNF143P52747 638 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-217ENST00000487825 TNNI3KQ59H18 835 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 GTF2IRD2BQ6EKJ0 949 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 KRT28Q7Z3Y7 464 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 GTF2IRD2Q86UP8 949 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 FAM178BQ8IXR5 827 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 CRACR2BQ8N4Y2 399 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-217ENST00000487825 USP33Q8TEY7 942 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 ZCCHC4Q9H5U6 513 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 BCAS3Q9H6U6 928 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 SPATA31A1Q5TZJ5 1347 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 LRRC37A3O60309 1634 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 PAPPAQ13219 1627 aa6.94□□□□□ -1.3
BRCA1-217ENST00000487825 TECPR2O15040 1411 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 C7orf72A4D263 438 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 TRIM13O60858 407 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 DDAH1O94760 285 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 THBDP07204 575 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 GLI4P10075 376 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 PFKLP17858 780 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 GPR162Q16538 588 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 SV2CQ496J9 727 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 LILRA6Q6PI73 481 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 CABP7Q86V35 215 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 TRIM59Q8IWR1 403 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 MICAL1Q8TDZ2 1067 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 COPS5Q92905 334 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 PARD6AQ9NPB6 346 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 LRP2BPQ9P2M1 347 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 PRKAG3Q9UGI9 489 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 IRS2Q9Y4H2 1338 aa6.93□□□□□ -1.3
BRCA1-217ENST00000487825 ARHGEF28Q8N1W1 1705 aaKnown RBP6.93□□□□□ -1.3
BRCA1-217ENST00000487825 TRBV23OR9-2A0A075B6M9 112 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 PLSCR1O15162 318 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 TBX1O43435 398 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 NPHS1O60500 1241 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 FUCA1P04066 466 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 ARID5AQ03989 594 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 TARBP2Q15633 366 aaKnown RBP6.92□□□□□ -1.3
BRCA1-217ENST00000487825 MBLAC2Q68D91 279 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 ALG3Q92685 438 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 MRGPRX3Q96LB0 322 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 MTA3Q9BTC8 594 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 MTFR1LQ9H019 292 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 ADCY9O60503 1353 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 TUBGCP6Q96RT7 1819 aa6.92□□□□□ -1.3
BRCA1-217ENST00000487825 ITGAVP06756 1048 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 ATF2P15336 505 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 HOXA5P20719 270 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 IGFBP6P24592 240 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-217ENST00000487825 DNAJA1P31689 397 aaKnown RBP6.91□□□□□ -1.3
BRCA1-217ENST00000487825 DNAJC5GQ8N7S2 189 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
BRCA1-217ENST00000487825 BTN2A2Q8WVV5 523 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 TINF2Q9BSI4 451 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 NKX2-4Q9H2Z4 354 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
BRCA1-217ENST00000487825 LMO7Q8WWI1 1683 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 FGRP09769 529 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 FBLN1P23142 703 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 MC3RP41968 323 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 ECI1P42126 302 aa6.9□□□□□ -1.3
BRCA1-217ENST00000487825 FXNQ16595 210 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms