RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 DHX37Q8IY37 1157 aaKnown RBP5.9□□□□□ -1.46
TTC3-220ENST00000487711 NIM1KQ8IY84 436 aa5.9□□□□□ -1.46
TTC3-220ENST00000487711 C2orf69Q8N8R5 385 aa5.9□□□□□ -1.46
TTC3-220ENST00000487711 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
TTC3-220ENST00000487711 NINJ1Q92982 152 aa5.9□□□□□ -1.46
TTC3-220ENST00000487711 C11orf84Q9BUA3 381 aaPredicted RBP5.9□□□□□ -1.46
TTC3-220ENST00000487711 INTS7Q9NVH2 962 aaKnown RBP5.9□□□□□ -1.46
TTC3-220ENST00000487711 PLAAQ9Y263 795 aa5.9□□□□□ -1.46
TTC3-220ENST00000487711 M0R2C6 588 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 SMARCA5O60264 1052 aaPredicted RBP5.89□□□□□ -1.47
TTC3-220ENST00000487711 JMJD7P0C870 316 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 PTPN1P18031 435 aaKnown RBP5.89□□□□□ -1.47
TTC3-220ENST00000487711 ITGA1P56199 1179 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 HTRA3P83110 453 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 VMACQ2NL98 169 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 CFAP100Q494V2 611 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 DALRD3Q5D0E6 543 aaKnown RBP5.89□□□□□ -1.47
TTC3-220ENST00000487711 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 HHIPL2Q6UWX4 724 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 TMC5Q6UXY8 1006 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 TTLL6Q8N841 843 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
TTC3-220ENST00000487711 SLC12A8A0AV02 714 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 FAM90A27PA6NNH2 459 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 GLRX3O76003 335 aaKnown RBP5.88□□□□□ -1.47
TTC3-220ENST00000487711 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
TTC3-220ENST00000487711 HSD3B2P26439 372 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 GJA4P35212 333 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 NEK4P51957 841 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 PLEKHG4Q58EX7 1191 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 CDCA2Q69YH5 1023 aaPredicted RBP5.88□□□□□ -1.47
TTC3-220ENST00000487711 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 LRRTM3Q86VH5 581 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 C1QL4Q86Z23 238 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 KRTAP19-1Q8IUB9 90 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 LINC00482Q8N8I6 264 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 KYQ8NBH2 561 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 MFSD3Q96ES6 412 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 CLIC6Q96NY7 704 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 TMEM209Q96SK2 561 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 PDGFDQ9GZP0 370 aaPredicted RBP5.88□□□□□ -1.47
TTC3-220ENST00000487711 SLKQ9H2G2 1235 aaPredicted RBP5.88□□□□□ -1.47
TTC3-220ENST00000487711 CABP5Q9NP86 173 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 RBPJLQ9UBG7 517 aa5.88□□□□□ -1.47
TTC3-220ENST00000487711 PRAMEF25A6NGN4 478 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 ACOT7O00154 380 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 SCDO00767 359 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 CLASP2O75122 1294 aaKnown RBP5.87□□□□□ -1.47
TTC3-220ENST00000487711 KRT37O76014 449 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 CLSTN1O94985 981 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 JAG1P78504 1218 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 CD276Q5ZPR3 534 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 CPZQ66K79 652 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 TTLL7Q6ZT98 887 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 SAPCD2Q86UD0 394 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 CHST14Q8NCH0 376 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 ZNF526Q8TF50 670 aaPredicted RBP5.87□□□□□ -1.47
TTC3-220ENST00000487711 ZSWIM3Q96MP5 696 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 HSPBP1Q9NZL4 362 aa5.87□□□□□ -1.47
TTC3-220ENST00000487711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.86□□□□□ -1.47
TTC3-220ENST00000487711 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
TTC3-220ENST00000487711 FFAR3O14843 346 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 KPNA6O60684 536 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 HIP1RO75146 1068 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 ENO2P09104 434 aaPredicted RBP5.86□□□□□ -1.47
TTC3-220ENST00000487711 THBS2P35442 1172 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 GYS2P54840 703 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 IRF9Q00978 393 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 CAP1Q01518 475 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 ADAM9Q13443 819 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 ARHGAP44Q17R89 818 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 VWA3BQ502W6 1294 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 FSTL4Q6MZW2 842 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 PKN3Q6P5Z2 889 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 LIPIQ6XZB0 460 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 NOSTRINQ8IVI9 506 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 ADGRG2Q8IZP9 1017 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 NTMQ9P121 344 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 ARHGAP28Q9P2N2 729 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 CROTQ9UKG9 612 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 WASF3Q9UPY6 502 aa5.86□□□□□ -1.47
TTC3-220ENST00000487711 KRTAP9-6A0A140TA67 174 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 A0A1B0GTL3 188 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 PTPDC1A2A3K4 754 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 C4BPAP04003 597 aaKnown RBP5.85□□□□□ -1.47
TTC3-220ENST00000487711 MECP2P51608 486 aaKnown RBP5.85□□□□□ -1.47
TTC3-220ENST00000487711 DBPQ10586 325 aaPredicted RBP5.85□□□□□ -1.47
TTC3-220ENST00000487711 SEC23AQ15436 765 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 TM4SF20Q53R12 229 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 PROSER1Q86XN7 944 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 DDX1Q92499 740 aaKnown RBP5.85□□□□□ -1.47
TTC3-220ENST00000487711 WRNIP1Q96S55 665 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 BOCQ9BWV1 1114 aa5.85□□□□□ -1.47
TTC3-220ENST00000487711 SPATA6Q9NWH7 488 aaPredicted RBP5.85□□□□□ -1.47
TTC3-220ENST00000487711 SH3D21A4FU49 640 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms