RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 RBPJLQ9UBG7 517 aa5.53□□□□□ -1.52
HMGB1P36-201ENST00000487709 WASF3Q9UPY6 502 aa5.53□□□□□ -1.52
HMGB1P36-201ENST00000487709 MSRB2Q9Y3D2 182 aa5.53□□□□□ -1.52
HMGB1P36-201ENST00000487709 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
HMGB1P36-201ENST00000487709 LRG1P02750 347 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 CYP4F3Q08477 520 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 SSRP1Q08945 709 aaKnown RBP5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 RASA3Q14644 834 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 CHRNA2Q15822 529 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 HS1BP3Q53T59 392 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 RALYLQ86SE5 291 aaKnown RBP5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 TRIM59Q8IWR1 403 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 NUDT10Q8NFP7 164 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 NUDT11Q96G61 164 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 SGSM3Q96HU1 749 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 CHAMP1Q96JM3 812 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 C11orf21Q9P2W6 132 aa5.52□□□□□ -1.53
HMGB1P36-201ENST00000487709 CNOT4O95628 575 aaKnown RBP5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 TGM1P22735 817 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 ECI1P42126 302 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 GTF2A2P52657 109 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 PRKD1Q15139 912 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 NRN1LQ496H8 165 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 ZC3H12BQ5HYM0 836 aaKnown RBP5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 IGFL4Q6B9Z1 124 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 BTN2A2Q8WVV5 523 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 LRRC37BQ96QE4 947 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 ADAM29Q9UKF5 820 aa5.51□□□□□ -1.53
HMGB1P36-201ENST00000487709 ARNTLO00327 626 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 MEFVO15553 781 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 FOXS1O43638 330 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 KCNAB2Q13303 367 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 FOXE3Q13461 319 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 HSP90AA2PQ14568 343 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 SLC10A6Q3KNW5 377 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 E4F1Q66K89 784 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 TCTN3Q6NUS6 607 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 RNF207Q6ZRF8 634 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 GPR155Q7Z3F1 870 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 GIMAP8Q8ND71 665 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 MICAL1Q8TDZ2 1067 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 MYOTQ9UBF9 498 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 PCDHA2Q9Y5H9 948 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 SHROOM4Q9ULL8 1493 aa5.5□□□□□ -1.53
HMGB1P36-201ENST00000487709 TBX1O43435 398 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 ZNF202O95125 648 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 SNRPB2P08579 225 aaKnown RBP5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 COL6A1P12109 1028 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 RCBTB1Q8NDN9 531 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 CHFRQ96EP1 664 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 MRGPRX3Q96LB0 322 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 LMF1Q96S06 567 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 DNAJC7Q99615 494 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 CDC6Q99741 560 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 CLDND1Q9NY35 253 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 PFDN2Q9UHV9 154 aa5.49□□□□□ -1.53
HMGB1P36-201ENST00000487709 KDM2BQ8NHM5 1336 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 TADA3O75528 432 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 DGKIO75912 1065 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 LCP1P13796 627 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 ABHD18Q0P651 414 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 SMN1Q16637 294 aaKnown RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 LONRF2Q1L5Z9 754 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 PRSS53Q2L4Q9 553 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 USP39Q53GS9 565 aaKnown RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 EMC4Q5J8M3 183 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 MIIPQ5JXC2 388 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 MRM1Q6IN84 353 aaKnown RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 ZSWIM2Q8NEG5 633 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 THAP3Q8WTV1 239 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 SPATA9Q9BWV2 254 aa5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 SLKQ9H2G2 1235 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 ZFR2Q9UPR6 939 aaKnown RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 WDR33Q9C0J8 1336 aaKnown RBP5.48□□□□□ -1.53
HMGB1P36-201ENST00000487709 TRAV20A0A0B4J274 112 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 H7BY64 318 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 KLHL18O94889 574 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 INHBEP58166 350 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 LSAMPQ13449 338 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 C2orf27AQ580R0 203 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 VASNQ6EMK4 673 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 Q6ZUG5 572 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 HOMER1Q86YM7 354 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 PPIL6Q8IXY8 311 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 IFNL2Q8IZJ0 200 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 AARSD1Q9BTE6 412 aaKnown RBP5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 PIF1Q9H611 641 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 SEC61A2Q9H9S3 476 aa5.47□□□□□ -1.53
HMGB1P36-201ENST00000487709 CCDC163A0A0D9SF12 145 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 TLDC2A0PJX2 215 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 FAM221BA6H8Z2 402 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 FBXO21O94952 628 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 KCNJ6P48051 423 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 DGCR2P98153 550 aa5.46□□□□□ -1.54
HMGB1P36-201ENST00000487709 GRIN1Q05586 938 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms