RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 CRYGNQ8WXF5 182 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 ATP6V0A1Q93050 837 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 ZNF576Q9H609 170 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 AGO4Q9HCK5 861 aaKnown RBP13.07□□□□□ -0.32
SPEN-205ENST00000487496 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
SPEN-205ENST00000487496 SETD4Q9NVD3 440 aa13.07□□□□□ -0.32
SPEN-205ENST00000487496 FAM86B1E9PN63 330 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 TREHO43280 583 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 NBNO60934 754 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 CXCL10P02778 98 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 CYP3A4P08684 503 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 FAM86B2P0C5J1 330 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 GNAT1P11488 350 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 ATP2A2P16615 1042 aaKnown RBP13.06□□□□□ -0.32
SPEN-205ENST00000487496 ZNF76P36508 570 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 RABGGTBP53611 331 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 ANAPC15P60006 121 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 RAB30Q15771 203 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 MCTP2Q6DN12 878 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 REXO1Q8N1G1 1221 aaKnown RBP13.06□□□□□ -0.32
SPEN-205ENST00000487496 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 SDF4Q9BRK5 362 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 VPS54Q9P1Q0 977 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 MSRAQ9UJ68 235 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 NFASCO94856 1347 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
SPEN-205ENST00000487496 TRIP12Q14669 1992 aaPredicted RBP13.05□□□□□ -0.32
SPEN-205ENST00000487496 CPLX1O14810 134 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 BAIAP3O94812 1187 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 THPOP40225 353 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 ADAM17P78536 824 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
SPEN-205ENST00000487496 STK3Q13188 491 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
SPEN-205ENST00000487496 MBTPS1Q14703 1052 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 NIPA1Q7RTP0 329 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 PHOSPHO2Q8TCD6 241 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 RASGRP4Q8TDF6 673 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 MYLIPQ8WY64 445 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 GLG1Q92896 1179 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 PCYT2Q99447 389 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 ERAP1Q9NZ08 941 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 YBX2Q9Y2T7 364 aaKnown RBP13.05□□□□□ -0.32
SPEN-205ENST00000487496 TANC1Q9C0D5 1861 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 NRCAMQ92823 1304 aa13.05□□□□□ -0.32
SPEN-205ENST00000487496 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 LAMA2P24043 3122 aaKnown RBP13.04□□□□□ -0.32
SPEN-205ENST00000487496 IGLV3-22A0A075B6J6 115 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 RSPH10B2B2RC85 870 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 RBAK-RBAKDNI3L0D1 243 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 LGR5O75473 907 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 DEXIO95424 95 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 RSPH10BP0C881 870 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 MARK3P27448 753 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 ACTR2P61160 394 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 CNKSR3Q6P9H4 555 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 CPLX2Q6PUV4 134 aaKnown RBP13.04□□□□□ -0.32
SPEN-205ENST00000487496 PLA2G4DQ86XP0 818 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 IL17RAQ96F46 866 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 SLC9A7Q96T83 725 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
SPEN-205ENST00000487496 EIF5BO60841 1220 aaKnown RBP13.03□□□□□ -0.32
SPEN-205ENST00000487496 CAND2O75155 1236 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 ATG7O95352 703 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 MYOGP15173 224 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 NLRP5P59047 1200 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 SCRN1Q12765 414 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 PPFIA1Q13136 1202 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 TCTN1Q2MV58 587 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 HERC6Q8IVU3 1022 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 AZI2Q9H6S1 392 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 SLC28A3Q9HAS3 691 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 TPCN1Q9ULQ1 816 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 EMSYQ7Z589 1322 aa13.03□□□□□ -0.32
SPEN-205ENST00000487496 ABHD14A-ACY1A0A1B0GW23 586 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 DDX39AO00148 427 aaKnown RBP13.02□□□□□ -0.33
SPEN-205ENST00000487496 IPO5O00410 1097 aaKnown RBP13.02□□□□□ -0.33
SPEN-205ENST00000487496 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.33
SPEN-205ENST00000487496 EDIL3O43854 480 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 PFKFB2O60825 505 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 SEC24BO95487 1268 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 CCNE2O96020 404 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 CTSHP09668 335 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 FOSL2P15408 326 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 CIITAP33076 1130 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 KCNJ6P48051 423 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
SPEN-205ENST00000487496 GRIK4Q16099 956 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 PLPPR4Q7Z2D5 763 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
SPEN-205ENST00000487496 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms