RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 RANBP17Q9H2T7 1088 aaKnown RBP14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 ADAM7Q9H2U9 754 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 RNPEPQ9H4A4 650 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 MRS2Q9HD23 443 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 DBR1Q9UK59 544 aaKnown RBP14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 TTC3P53804 2025 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
ATPAF1-205ENST00000487193 CAND2O75155 1236 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 TSPY3P0CV98 308 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 TSPY8P0CW00 308 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 SMIM10L2AP0DMW4 78 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 SMIM10L2BP0DMW5 78 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 IBSPP21815 317 aaPredicted RBP14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 ATP8B2P98198 1209 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 TBC1D8BQ0IIM8 1120 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 TDGQ13569 410 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 SSH3Q8TE77 659 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 SECISBP2LQ93073 1101 aaKnown RBP14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 BCL11AQ9H165 835 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 PCDHB12Q9Y5F1 795 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 GPR179Q6PRD1 2367 aa14.38□□□□□ -0.11
ATPAF1-205ENST00000487193 PPFIA4O75335 1185 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 FGF18O76093 207 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 CHRNA1P02708 482 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 CFHP08603 1231 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 MTHFRP42898 656 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 UBE3AQ05086 875 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 ITIH3Q06033 890 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 CCDC96Q2M329 555 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 KANK3Q6NY19 840 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 CYP26B1Q9NR63 512 aa14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
ATPAF1-205ENST00000487193 KRBA1A5PL33 1030 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 HIDE1A8MVS5 230 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 FSCN2O14926 492 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 NARSO43776 548 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 STXBP2Q15833 593 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 FAM26DQ5JW98 314 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 RARS2Q5T160 578 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 PDE12Q6L8Q7 609 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 THNSL1Q8IYQ7 743 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 C12orf76Q8N812 135 aaPredicted RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 NEDD1Q8NHV4 660 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 RASGRP4Q8TDF6 673 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 CASP10Q92851 521 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 C16orf70Q9BSU1 422 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 PUS7LQ9H0K6 701 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 SETD4Q9NVD3 440 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 CA14Q9ULX7 337 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 DUSP12Q9UNI6 340 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 NOP58Q9Y2X3 529 aaKnown RBP14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 MRVI1Q9Y6F6 885 aa14.36□□□□□ -0.11
ATPAF1-205ENST00000487193 POTEMA6NI47 508 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 TFAP4Q01664 338 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 LPIN1Q14693 890 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 HSDL1Q3SXM5 330 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 RTN4RL1Q86UN2 441 aaPredicted RBP14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 SPATA33Q96N06 139 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 TBC1D17Q9HA65 648 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 ZNF287Q9HBT7 754 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 ENTPD7Q9NQZ7 604 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 ZMIZ1Q9ULJ6 1067 aa14.35□□□□□ -0.11
ATPAF1-205ENST00000487193 H3BRB1 525 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 EOMESO95936 686 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 PROS1P07225 676 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 SYDE2Q5VT97 1194 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 NPAS4Q8IUM7 802 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 LINC01599Q8WXQ3 324 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 TUT1Q9H6E5 874 aaKnown RBP14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 KCNK12Q9HB15 430 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 IL1RAPL2Q9NP60 686 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 PARD6AQ9NPB6 346 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 PAG1Q9NWQ8 432 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 STX8Q9UNK0 236 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 SIT1Q9Y3P8 196 aa14.34□□□□□ -0.11
ATPAF1-205ENST00000487193 GSG1L2A8MUP6 293 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 TGM1P22735 817 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 HOXC8P31273 242 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 ATAT1Q5SQI0 421 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 MAML2Q8IZL2 1156 aaPredicted RBP14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 TBC1D5Q92609 795 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 ACSF2Q96CM8 615 aaPredicted RBP14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 C1orf115Q9H7X2 142 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 WNT16Q9UBV4 365 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 LRFN2Q9ULH4 789 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 TNNQ9UQP3 1299 aa14.33□□□□□ -0.12
ATPAF1-205ENST00000487193 USTQ9Y2C2 406 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms