RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 INHBEP58166 350 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 RASGRF1Q13972 1273 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 NCAPHQ15003 741 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 PRKD1Q15139 912 aaPredicted RBP5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 NRN1LQ496H8 165 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 USP39Q53GS9 565 aaKnown RBP5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 VHLLQ6RSH7 139 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 PROSER1Q86XN7 944 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 BVESQ8NE79 360 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 CEP89Q96ST8 783 aa5.28□□□□□ -1.56
SNRNP27-204ENST00000487029 TLDC2A0PJX2 215 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 FAM221BA6H8Z2 402 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 CYP7B1O75881 506 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 ABHD18Q0P651 414 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 STEAP3Q658P3 488 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 TRIM59Q8IWR1 403 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 TMEM169Q96HH4 297 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 LRRC37BQ96QE4 947 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 TMEM209Q96SK2 561 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 NKX2-4Q9H2Z4 354 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 ZFR2Q9UPR6 939 aaKnown RBP5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 PCDHB4Q9Y5E5 795 aa5.27□□□□□ -1.57
SNRNP27-204ENST00000487029 WDR33Q9C0J8 1336 aaKnown RBP5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 TBX1O43435 398 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 LCP1P13796 627 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 DPTQ07507 201 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 IFRD2Q12894 506 aaPredicted RBP5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 AGBL4Q5VU57 503 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 MRM1Q6IN84 353 aaKnown RBP5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 Q6ZUG5 572 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 EEPD1Q7L9B9 569 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 GPR155Q7Z3F1 870 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 KREMEN2Q8NCW0 462 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 RCBTB1Q8NDN9 531 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 ST13P5Q8NFI4 369 aaPredicted RBP5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 LMF1Q96S06 567 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 TRIM8Q9BZR9 551 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 SEC61A2Q9H9S3 476 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 TBX22Q9Y458 520 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 SLC4A7Q9Y6M7 1214 aa5.26□□□□□ -1.57
SNRNP27-204ENST00000487029 MTERF2Q49AM1 385 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 EMC4Q5J8M3 183 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 Q6ZSN1 163 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 RALYLQ86SE5 291 aaKnown RBP5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 TAX1BP1Q86VP1 789 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 DIO2Q92813 273 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 APBA2Q99767 749 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 CSRNP2Q9H175 543 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 PTPN22Q9Y2R2 807 aa5.25□□□□□ -1.57
SNRNP27-204ENST00000487029 KNG1P01042 644 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 NAT2P11245 290 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 CANXP27824 592 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 CSF2RBP32927 897 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 NANOS3P60323 173 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 RBM10P98175 930 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 PTH1RQ03431 593 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 HNRNPA0Q13151 305 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 SF1Q15637 639 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 LSM12Q3MHD2 195 aaKnown RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 HS1BP3Q53T59 392 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 IQCEQ6IPM2 695 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 POMZP3Q6PJE2 187 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 JAZF1Q86VZ6 243 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 FUKQ8N0W3 1084 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 AMER2Q8N7J2 671 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 EDAQ92838 391 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 ZNF669Q96BR6 464 aaPredicted RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 DNAJC7Q99615 494 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 EPN3Q9H201 632 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 COA3Q9Y2R0 106 aaPredicted RBP5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 CADPSQ9ULU8 1353 aa5.24□□□□□ -1.57
SNRNP27-204ENST00000487029 SUSD5O60279 629 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 ECI1P42126 302 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 ZNF143P52747 638 aaPredicted RBP5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 PRSS53Q2L4Q9 553 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 E4F1Q66K89 784 aaPredicted RBP5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 DENND5AQ6IQ26 1287 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 SDE2Q6IQ49 451 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 FAM177A1Q8N128 213 aaPredicted RBP5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 DTX3Q8N9I9 347 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 GIMAP8Q8ND71 665 aaPredicted RBP5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 BTN2A2Q8WVV5 523 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 AJUBAQ96IF1 538 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 WRNIP1Q96S55 665 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 HSPBP1Q9NZL4 362 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 MYOTQ9UBF9 498 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 TNFRSF18Q9Y5U5 241 aa5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 MRPL42Q9Y6G3 142 aaKnown RBP5.23□□□□□ -1.57
SNRNP27-204ENST00000487029 NOP56O00567 594 aaKnown RBP5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 C1SP09871 688 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 GTF2A2P52657 109 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 PURAQ00577 322 aaKnown RBP5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 GRIN1Q05586 938 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 CHRNA2Q15822 529 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 SLC10A6Q3KNW5 377 aa5.22□□□□□ -1.57
SNRNP27-204ENST00000487029 SPATC1Q76KD6 591 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms