RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TCP11Q8WWU5 503 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 OSBPL7Q9BZF2 842 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 OSGEPQ9NPF4 335 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 DNAJC17Q9NVM6 304 aaKnown RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 PNMA2Q9UL42 364 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ADAM9Q13443 819 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 GRM4Q14833 912 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ASIC2Q16515 512 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 C12orf60Q5U649 245 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 SLC24A3Q9HC58 644 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 GDF3Q9NR23 364 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 PCDHB13Q9Y5F0 798 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L15C9J2P7 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L13C9JLJ4 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L11C9JVI0 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L18D6R9N7 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L22D6RA61 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L17D6RBQ6 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L19D6RCP7 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L20D6RJB6 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 UPP2O95045 317 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ZNF844Q08AG5 666 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L24Q0WX57 530 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 PLS1Q14651 629 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 FAM26FQ5R3K3 315 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 PTF1AQ7RTS3 328 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 CNPY4Q8N129 248 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 USP38Q8NB14 1042 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 RDH13Q8NBN7 331 aa13.57□□□□□ -0.24
HSPG2-211ENST00000486901 U2AF1L4Q8WU68 220 aaKnown RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 GEMIN8Q9NWZ8 242 aaKnown RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
HSPG2-211ENST00000486901 CLTAP09496 248 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 SKOR1P84550 965 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 KCNA1Q09470 495 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 UNC13DQ70J99 1090 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 ZNF571Q7Z3V5 609 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 METTL13Q8N6R0 699 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 CAVIN3Q969G5 261 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 MTFR1LQ9H019 292 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 ATP6V0A2Q9Y487 856 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 TNS2Q63HR2 1409 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 DDX60Q8IY21 1712 aaKnown RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 SHBGP04278 402 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 LRRC14Q15048 493 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 CDC37Q16543 378 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 TBC1D9BQ66K14 1250 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 OTUD6AQ7L8S5 288 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 CCDC25Q86WR0 208 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 AJAP1Q9UKB5 411 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 TNNC1P63316 161 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 KCNH2Q12809 1159 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 PABPC4Q13310 644 aaKnown RBP eCLIP13.56□□□□□ -0.244e-7■■■■□ 23.3
HSPG2-211ENST00000486901 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 ASTE1Q2TB18 679 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 MAEAQ7L5Y9 396 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 RAPGEF5Q92565 580 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 THOC1Q96FV9 657 aaKnown RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 MTA3Q9BTC8 594 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 ATP8A2Q9NTI2 1148 aa13.56□□□□□ -0.24
HSPG2-211ENST00000486901 NOC2LQ9Y3T9 749 aaKnown RBP13.56□□□□□ -0.24
HSPG2-211ENST00000486901 A0A1W2PQJ5 194 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 POTEFA5A3E0 1075 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 FAM196BA6NMK8 535 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 GFPT2O94808 682 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 POTEIP0CG38 1075 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 RASA1P20936 1047 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 PPP1R7Q15435 360 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 NAB2Q15742 525 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 HIBCHQ6NVY1 386 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 POTEGQ6S5H5 508 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 POTEEQ6S8J3 1075 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 GPBP1Q86WP2 473 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 ZNF804BA4D1E1 1349 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 GMNCA6NCL1 334 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 MPHOSPH10O00566 681 aaKnown RBP13.55□□□□□ -0.24
HSPG2-211ENST00000486901 SERPING1P05155 500 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 NR2F2P24468 414 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 USP8P40818 1118 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 PLTPP55058 493 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 NFIXQ14938 502 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 TMEM266Q2M3C6 531 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 MEI1Q5TIA1 1274 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
HSPG2-211ENST00000486901 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms