RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 IQCF3P0C7M6 154 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 SMIM10L2AP0DMW4 78 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 SMIM10L2BP0DMW5 78 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 ARP10275 920 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 ACRP10323 421 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 CIITAP33076 1130 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 ZNF76P36508 570 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 NLRP5P59047 1200 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 ITGB3BPQ13352 177 aaPredicted RBP18.17■□□□□ 0.5
HDAC8-218ENST00000486704 HIC1Q14526 733 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 SERINC5Q86VE9 423 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 RASGRP4Q8TDF6 673 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 SDF4Q9BRK5 362 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 MTIF3Q9H2K0 278 aaKnown RBP18.17■□□□□ 0.5
HDAC8-218ENST00000486704 PKD2L1Q9P0L9 805 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 PCDHA4Q9UN74 947 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 PTPRSQ13332 1948 aa18.17■□□□□ 0.5
HDAC8-218ENST00000486704 C17orf102A2RUQ5 167 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 LGR5O75473 907 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 FGBP02675 491 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 SELPP16109 830 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 NEK4P51957 841 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 NPY5RQ15761 445 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
HDAC8-218ENST00000486704 UTP14CQ5TAP6 766 aaKnown RBP18.16■□□□□ 0.5
HDAC8-218ENST00000486704 PLA2G4DQ86XP0 818 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 C22orf23Q9BZE7 217 aa18.16■□□□□ 0.5
HDAC8-218ENST00000486704 M0R2N6 131 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 CKBP12277 381 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 ADAM17P78536 824 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 ME3Q16798 604 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 LRRC8DQ7L1W4 858 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 SMARCAD1Q9H4L7 1026 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 ERAP1Q9NZ08 941 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 MICAL3Q7RTP6 2002 aa18.15■□□□□ 0.5
HDAC8-218ENST00000486704 TMEM265A0A087WTH1 108 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.14■□□□□ 0.49
HDAC8-218ENST00000486704 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.14■□□□□ 0.49
HDAC8-218ENST00000486704 LARGE1O95461 756 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 CTDNEP1O95476 244 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 GNAT1P11488 350 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 USP11P51784 963 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 ACTR2P61160 394 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 ZNF200P98182 395 aaPredicted RBP18.14■□□□□ 0.49
HDAC8-218ENST00000486704 BLIDQ8IZY5 108 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 ATP6V0A1Q93050 837 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 WNT8BQ93098 351 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 PHF20Q9BVI0 1012 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 RNPEPQ9H4A4 650 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 NRCAMQ92823 1304 aa18.14■□□□□ 0.49
HDAC8-218ENST00000486704 IPO5O00410 1097 aaKnown RBP18.13■□□□□ 0.49
HDAC8-218ENST00000486704 DHX15O43143 795 aaKnown RBP18.13■□□□□ 0.49
HDAC8-218ENST00000486704 CAND2O75155 1236 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 ATG7O95352 703 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 XBP1P17861 261 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 TRAF7Q6Q0C0 670 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 DEFB123Q8N688 67 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 LMBR1Q8WVP7 490 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 WASF1Q92558 559 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 LENG9Q96B70 501 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 PCYT2Q99447 389 aa18.13■□□□□ 0.49
HDAC8-218ENST00000486704 CXXC1Q9P0U4 656 aaPredicted RBP18.13■□□□□ 0.49
HDAC8-218ENST00000486704 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 TREHO43280 583 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 EDIL3O43854 480 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 CCNE2O96020 404 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 CXCL10P02778 98 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 ACTN1P12814 892 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
HDAC8-218ENST00000486704 ZNF697Q5TEC3 545 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 Q7L0L9 218 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 OTOP2Q7RTS6 562 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 PLPPR4Q7Z2D5 763 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 DEFB128Q7Z7B8 93 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 GLG1Q92896 1179 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 KIF2CQ99661 725 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 AZI2Q9H6S1 392 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 TBC1D22BQ9NU19 505 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 SETD4Q9NVD3 440 aa18.12■□□□□ 0.49
HDAC8-218ENST00000486704 ORC3Q9UBD5 711 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-218ENST00000486704 BAIAP3O94812 1187 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 SLC26A2P50443 739 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 PPFIA1Q13136 1202 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 GPNMBQ14956 572 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 PRR16Q569H4 304 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 ZNF618Q5T7W0 954 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 MOXD1Q6UVY6 613 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 KRT25Q7Z3Z0 450 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 NECAB1Q8N987 351 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
HDAC8-218ENST00000486704 TBCKQ8TEA7 893 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 MTMR10Q9NXD2 777 aa18.11■□□□□ 0.49
HDAC8-218ENST00000486704 LOXHD1Q8IVV2 1947 aa18.1■□□□□ 0.49
HDAC8-218ENST00000486704 MBLAC1A4D2B0 266 aaPredicted RBP18.1■□□□□ 0.49
HDAC8-218ENST00000486704 NBNO60934 754 aa18.1■□□□□ 0.49
HDAC8-218ENST00000486704 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
HDAC8-218ENST00000486704 DNAJB2P25686 324 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms