RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TTLL4Q14679 1199 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 IQSEC1Q6DN90 963 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 GPR153Q6NV75 609 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 DTHD1Q6ZMT9 781 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SLFN12Q8IYM2 578 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SCFD2Q8WU76 684 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SENP7Q9BQF6 1050 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SENP6Q9GZR1 1112 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 TTC12Q9H892 705 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 DDX20Q9UHI6 824 aaKnown RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 NRBP1Q9UHY1 535 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 VAV3Q9UKW4 847 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 PCDHA7Q9UN72 937 aa14.42□□□□□ -0.1
HDAC6-229ENST00000486665 SRPRBQ9Y5M8 271 aaKnown RBP14.42□□□□□ -0.1
HDAC6-229ENST00000486665 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 DDX39AO00148 427 aaKnown RBP14.41□□□□□ -0.1
HDAC6-229ENST00000486665 CNGA1P29973 690 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 AXDND1Q5T1B0 1012 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-229ENST00000486665 ARL6IP4Q66PJ3 421 aaKnown RBP14.41□□□□□ -0.1
HDAC6-229ENST00000486665 B3GNT9Q6UX72 402 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 CYFIP1Q7L576 1253 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 KRI1Q8N9T8 703 aaKnown RBP14.41□□□□□ -0.1
HDAC6-229ENST00000486665 KCNG4Q8TDN1 519 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 RIT2Q99578 217 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 UNC45AQ9H3U1 944 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 TBC1D22BQ9NU19 505 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 FAM184BQ9ULE4 1060 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 PCDHA12Q9UN75 941 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 NFASCO94856 1347 aa14.41□□□□□ -0.1
HDAC6-229ENST00000486665 EML1O00423 815 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 GAS7O60861 476 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 GGPS1O95749 300 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 CCNE2O96020 404 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 ME1P48163 572 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 FXR2P51116 673 aaKnown RBP eCLIP14.4□□□□□ -0.15e-6■■□□□ 12.9
HDAC6-229ENST00000486665 ARHGAP1Q07960 439 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 SPIRE1Q08AE8 756 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 NEDD9Q14511 834 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 DUSP28Q4G0W2 176 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 SPECC1Q5M775 1068 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 CELF3Q5SZQ8 465 aaKnown RBP14.4□□□□□ -0.1
HDAC6-229ENST00000486665 FERMT2Q96AC1 680 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 LENG1Q96BZ8 264 aaPredicted RBP14.4□□□□□ -0.1
HDAC6-229ENST00000486665 SDF4Q9BRK5 362 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 CSRNP2Q9H175 543 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 GNEQ9Y223 722 aaKnown RBP14.4□□□□□ -0.1
HDAC6-229ENST00000486665 CDH23Q9H251 3354 aa14.4□□□□□ -0.1
HDAC6-229ENST00000486665 PP2D1A8MPX8 630 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 CUTAO60888 179 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 GADD45BO75293 160 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-229ENST00000486665 PRPF40AO75400 957 aaKnown RBP14.39□□□□□ -0.11
HDAC6-229ENST00000486665 CDC25AP30304 524 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 PPP2R5CQ13362 524 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 TPRNQ4KMQ1 711 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 USP49Q70CQ1 688 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 DHX37Q8IY37 1157 aaKnown RBP14.39□□□□□ -0.11
HDAC6-229ENST00000486665 IGSF22Q8N9C0 903 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 TMEM87AQ8NBN3 555 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 GBP4Q96PP9 640 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 MLXIPQ9HAP2 919 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 STXBP5LQ9Y2K9 1186 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 KIAA1217Q5T5P2 1943 aa14.39□□□□□ -0.11
HDAC6-229ENST00000486665 POTEMA6NI47 508 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 SEPT4O43236 478 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-229ENST00000486665 CHMP2AO43633 222 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 GH1P01241 217 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 AKR1A1P14550 325 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 RTP1P59025 263 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 IRX5P78411 483 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-229ENST00000486665 SP4Q02446 784 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 PDIA5Q14554 519 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 TMEM266Q2M3C6 531 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 NCAPH2Q6IBW4 605 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 SHC4Q6S5L8 630 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 METTL7BQ6UX53 244 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-229ENST00000486665 GUCD1Q96NT3 240 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 JPH1Q9HDC5 661 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-229ENST00000486665 SLC9A2Q9UBY0 812 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 LRWD1Q9UFC0 647 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 TCHHQ07283 1943 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 VCANP13611 3396 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 ELP1O95163 1332 aa14.38□□□□□ -0.11
HDAC6-229ENST00000486665 SPTBN5Q9NRC6 3674 aaKnown RBP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 GSTTP1A0A1W2PQM5 241 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 DNM1LO00429 736 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 NKRFO15226 690 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 LONP1P36776 959 aaKnown RBP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 ACTR2P61160 394 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 KRT76Q01546 638 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 LAMC2Q13753 1193 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
HDAC6-229ENST00000486665 ZNF746Q6NUN9 644 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-229ENST00000486665 ABHD15Q6UXT9 468 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms