RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 RPTORQ8N122 1335 aa22.57■■□□□ 1.2
HPS3-206ENST00000486530 GPR162Q16538 588 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 SAMD3Q8N6K7 520 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 HSD17B14Q9BPX1 270 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 NDST4Q9H3R1 872 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 TBC1D7Q9P0N9 293 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 A0A1W2PQJ5 194 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 VCAM1P19320 739 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 RAD51AP2Q09MP3 1159 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 MTMR2Q13614 643 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 PPP4R3CPQ6ZMV5 832 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 ZNF710Q8N1W2 664 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 SCFD1Q8WVM8 642 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 CLEC4DQ8WXI8 215 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 ERO1AQ96HE7 468 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 REEP2Q9BRK0 252 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 ZNF577Q9BSK1 485 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 FGFBP2Q9BYJ0 223 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 EMILIN3Q9NT22 766 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 MAP3K20Q9NYL2 800 aaKnown RBP22.56■■□□□ 1.2
HPS3-206ENST00000486530 PPP1R9AQ9ULJ8 1098 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 PPP2R3BQ9Y5P8 575 aa22.56■■□□□ 1.2
HPS3-206ENST00000486530 SOCS7O14512 581 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 GNG11P61952 73 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 SCYL3Q8IZE3 742 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 ANKRD7Q92527 254 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 PCMTD1Q96MG8 357 aaPredicted RBP22.55■■□□□ 1.2
HPS3-206ENST00000486530 MXRA8Q9BRK3 442 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 BHMT2Q9H2M3 363 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 ZNF215Q9UL58 517 aaPredicted RBP22.55■■□□□ 1.2
HPS3-206ENST00000486530 COL4A3BPQ9Y5P4 624 aa22.55■■□□□ 1.2
HPS3-206ENST00000486530 TRAF5O00463 557 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 FLOT1O75955 427 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 GNA14O95837 355 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 FDX1P10109 184 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 BCRP11274 1271 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 ZBED6P86452 979 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 NCBP1Q09161 790 aaKnown RBP22.54■■□□□ 1.2
HPS3-206ENST00000486530 TEKT3Q9BXF9 490 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 KCTD10Q9H3F6 313 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 ZHX3Q9H4I2 956 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 AS3MTQ9HBK9 375 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 RGL1Q9NZL6 768 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 PHIPQ8WWQ0 1821 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 NFIBO00712 420 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 RRP9O43818 475 aaKnown RBP22.54■■□□□ 1.2
HPS3-206ENST00000486530 CASQ1P31415 396 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 MEA1Q16626 185 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 NIPA1Q7RTP0 329 aa22.54■■□□□ 1.2
HPS3-206ENST00000486530 ADARB2Q9NS39 739 aaKnown RBP22.54■■□□□ 1.2
HPS3-206ENST00000486530 RASSF10A6NK89 507 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 NKRFO15226 690 aaKnown RBP eCLIP22.53■■□□□ 1.2
HPS3-206ENST00000486530 FANCGO15287 622 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 CHMP2AO43633 222 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 ALAS1P13196 640 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 EDRF1Q3B7T1 1238 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 NELFCDQ8IXH7 590 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 ZC3H3Q8IXZ2 948 aaKnown RBP22.53■■□□□ 1.2
HPS3-206ENST00000486530 CPXCR1Q8N123 301 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 ZNF397Q8NF99 534 aaPredicted RBP22.53■■□□□ 1.2
HPS3-206ENST00000486530 ZKSCAN4Q969J2 545 aaPredicted RBP22.53■■□□□ 1.2
HPS3-206ENST00000486530 DYDC2Q96IM9 177 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 RIT2Q99578 217 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 RPAP3Q9H6T3 665 aaPredicted RBP22.53■■□□□ 1.2
HPS3-206ENST00000486530 FZD1Q9UP38 647 aa22.53■■□□□ 1.2
HPS3-206ENST00000486530 CTDP1Q9Y5B0 961 aaPredicted RBP22.53■■□□□ 1.2
HPS3-206ENST00000486530 FRMPD4Q14CM0 1322 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 TBCAO75347 108 aaKnown RBP22.52■■□□□ 1.2
HPS3-206ENST00000486530 SLITRK3O94933 977 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 ARP10275 920 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 KLK7P49862 253 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 DGKZQ13574 1117 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 CTTNQ14247 550 aaKnown RBP22.52■■□□□ 1.2
HPS3-206ENST00000486530 SFR1Q86XK3 245 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 ACRBPQ8NEB7 543 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 WRNIP1Q96S55 665 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 RUSC1Q9BVN2 902 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 RAVER2Q9HCJ3 691 aaKnown RBP22.52■■□□□ 1.2
HPS3-206ENST00000486530 LZTFL1Q9NQ48 299 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 ZNHIT6Q9NWK9 470 aaKnown RBP22.52■■□□□ 1.2
HPS3-206ENST00000486530 COL20A1Q9P218 1284 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 SIK3Q9Y2K2 1263 aa22.52■■□□□ 1.2
HPS3-206ENST00000486530 IPO5O00410 1097 aaKnown RBP22.51■■□□□ 1.19
HPS3-206ENST00000486530 ZBED4O75132 1171 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 MARSP56192 900 aaKnown RBP22.51■■□□□ 1.19
HPS3-206ENST00000486530 BACE1P56817 501 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 EPHA7Q15375 998 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 CCDC40Q4G0X9 1142 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 B3GNT9Q6UX72 402 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 EPM2AIP1Q7L775 607 aaPredicted RBP22.51■■□□□ 1.19
HPS3-206ENST00000486530 NEK9Q8TD19 979 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 WDR24Q96S15 920 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 CHP1Q99653 195 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 UNC45AQ9H3U1 944 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 PICK1Q9NRD5 415 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 AGPAT5Q9NUQ2 364 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 COL11A1P12107 1806 aaPredicted RBP22.51■■□□□ 1.19
HPS3-206ENST00000486530 KIF5CO60282 957 aa22.51■■□□□ 1.19
HPS3-206ENST00000486530 NDUFA10O95299 355 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms