RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 PLA2G4DQ86XP0 818 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 STAMQ92783 540 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 CDK5RAP3Q96JB5 506 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 FAM20AQ96MK3 541 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 MTRQ99707 1265 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 HOMER2Q9NSB8 354 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 FBXO40Q9UH90 709 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 PLXNB2O15031 1838 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 KDM3AQ9Y4C1 1321 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 POTEMA6NI47 508 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 GOLGA6L6A8MZA4 724 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 ERCC5P28715 1186 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 CYP2C19P33261 490 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 ZNF75DP51815 510 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 CUL4BQ13620 913 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 NCAPHQ15003 741 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 PRR16Q569H4 304 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 OLFML2BQ68BL8 750 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 SNX29Q8TEQ0 813 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 TBC1D5Q92609 795 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 BLZF1Q9H2G9 400 aa16.35■□□□□ 0.21
POLR2J3-204ENST00000486319 RPN1P04843 607 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 CAPN2P17655 700 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 CASP1P29466 404 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 ANKRD35Q8N283 1001 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 ETNPPLQ8TBG4 499 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 MAML3Q96JK9 1138 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 PLIN2Q99541 437 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 LRRC27Q9C0I9 530 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 NT5C3AQ9H0P0 336 aa16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 DIS3Q9Y2L1 958 aaKnown RBP16.34■□□□□ 0.21
POLR2J3-204ENST00000486319 FAM86B1E9PN63 330 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 FAM86B2P0C5J1 330 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 ALAS1P13196 640 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 CCND3P30281 292 aaPredicted RBP16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 CDC25BP30305 580 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 GRB10Q13322 594 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 KCNB1Q14721 858 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 ZNF792Q3KQV3 632 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 TKFCQ3LXA3 575 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 ZNF658Q5TYW1 1059 aaPredicted RBP16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 ENOX1Q8TC92 643 aaKnown RBP16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 CLEC4DQ8WXI8 215 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 CCDC47Q96A33 483 aaKnown RBP16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 LENG9Q96B70 501 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 MRFAP1L1Q96HT8 127 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 TRERF1Q96PN7 1200 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 PNMA5Q96PV4 448 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 ACAD9Q9H845 621 aa16.33■□□□□ 0.2
POLR2J3-204ENST00000486319 IGHA2P01877 340 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 TPM3P06753 285 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 CNGA1P29973 690 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 TMEM119Q4V9L6 283 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 HYIQ5T013 277 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 HAUS3Q68CZ6 603 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 SV2BQ7L1I2 683 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 ERMNQ8TAM6 284 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 CRISPLD2Q9H0B8 497 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
POLR2J3-204ENST00000486319 IGLV3-22A0A075B6J6 115 aa16.31■□□□□ 0.2
POLR2J3-204ENST00000486319 MSH4O15457 936 aa16.31■□□□□ 0.2
POLR2J3-204ENST00000486319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.2
POLR2J3-204ENST00000486319 LARP4BQ92615 738 aaKnown RBP16.31■□□□□ 0.2
POLR2J3-204ENST00000486319 MAF1Q9H063 256 aa16.31■□□□□ 0.2
POLR2J3-204ENST00000486319 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 NFIBO00712 420 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 LRRC15Q8TF66 581 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 RAD54LQ92698 747 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
POLR2J3-204ENST00000486319 FARP2O94887 1054 aaPredicted RBP16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 CYBAP13498 195 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 MUM1L1Q5H9M0 696 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 GJA10Q969M2 543 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 A1CFQ9NQ94 594 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 BLOC1S4Q9NUP1 217 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 LOXHD1Q8IVV2 1947 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 ESPNB1AK53 854 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 PPP1R3GB7ZBB8 358 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 KLRC4O43908 158 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 MSCO60682 206 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 KMT5BQ4FZB7 885 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 LHX8Q68G74 356 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 MSL3Q8N5Y2 521 aaKnown RBP16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 KCTD17Q8N5Z5 321 aa16.29■□□□□ 0.2
POLR2J3-204ENST00000486319 HSD3B7Q9H2F3 369 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms