RNA–Protein interactions for RNA: ENST00000486271.5

NEPRO-217, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 2,842 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-217ENST00000486271 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 EPS15P42566 896 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 KCNH2Q12809 1159 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 GJB7Q6PEY0 223 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 CAPS2Q9BXY5 557 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 BMP2KQ9NSY1 1161 aaPredicted RBP12.94□□□□□ -0.34
NEPRO-217ENST00000486271 CEP72Q9P209 647 aa12.94□□□□□ -0.34
NEPRO-217ENST00000486271 ZEB2O60315 1214 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 SHMT1P34896 483 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 GABPAQ06546 454 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 KCNA1Q09470 495 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PSMD2Q13200 908 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PACS2Q86VP3 889 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 DDX42Q86XP3 938 aaKnown RBP eCLIP12.93□□□□□ -0.34
NEPRO-217ENST00000486271 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 BCAS4Q8TDM0 211 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 SERPINB13Q9UIV8 391 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PCDHA2Q9Y5H9 948 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 RSPH10B2B2RC85 870 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 RSPH10BP0C881 870 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 NOP2P46087 812 aaKnown RBP12.93□□□□□ -0.34
NEPRO-217ENST00000486271 CLK2P49760 499 aaKnown RBP12.93□□□□□ -0.34
NEPRO-217ENST00000486271 MRPL12P52815 198 aaKnown RBP12.93□□□□□ -0.34
NEPRO-217ENST00000486271 EPHB4P54760 987 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PTK2Q05397 1052 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 NAB2Q15742 525 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 USH1GQ495M9 461 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PRR16Q569H4 304 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 CASKIN2Q8WXE0 1202 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
NEPRO-217ENST00000486271 NRAPQ86VF7 1730 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 SSU72P8A0A1W2PR75 194 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 GRID2IPA4D2P6 1211 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-217ENST00000486271 CLIC2O15247 247 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 HSF2BPO75031 334 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 SNHG28P0DPA3 235 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 NR2F2P24468 414 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 NOVP48745 357 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 DCAF17Q5H9S7 520 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-217ENST00000486271 TCERG1LQ5VWI1 586 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 KCTD10Q9H3F6 313 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 CENPHQ9H3R5 247 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 AJAP1Q9UKB5 411 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-217ENST00000486271 PCDHA1Q9Y5I3 950 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 GAKO14976 1311 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 KCNK3O14649 394 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 ZBTB5O15062 677 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 MYBP10242 640 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 POLD1P28340 1107 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 ASIC2Q16515 512 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 ZNF572Q7Z3I7 529 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-217ENST00000486271 ZNF571Q7Z3V5 609 aaPredicted RBP12.92□□□□□ -0.34
NEPRO-217ENST00000486271 CCDC65Q8IXS2 484 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 CYP2W1Q8TAV3 490 aa12.92□□□□□ -0.34
NEPRO-217ENST00000486271 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 RAD51CO43502 376 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 CASP4P49662 377 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 NNTQ13423 1086 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 SLC18A3Q16572 532 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 KSR1Q8IVT5 923 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 OR2W6PQ8NHA6 318 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
NEPRO-217ENST00000486271 CDK5RAP2Q96SN8 1893 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 HOXD13P35453 343 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 LIG3P49916 1009 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 CORO7P57737 925 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 PPFIA1Q13136 1202 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 SFR1Q86XK3 245 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 CATSPER3Q86XQ3 398 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 PROM2Q8N271 834 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 BCS1LQ9Y276 419 aa12.91□□□□□ -0.34
NEPRO-217ENST00000486271 ZBTB39O15060 712 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 HOXA13P31271 388 aaPredicted RBP12.9□□□□□ -0.34
NEPRO-217ENST00000486271 GUCY1A3Q02108 690 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 CDC42EP5Q6NZY7 148 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 IQCDQ96DY2 449 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 RBM17Q96I25 401 aaKnown RBP12.9□□□□□ -0.34
NEPRO-217ENST00000486271 SPAG5Q96R06 1193 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 SH3GL2Q99962 352 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 GANQ9H2C0 597 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 CEP104O60308 925 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 SHOX2O60902 331 aaPredicted RBP12.9□□□□□ -0.34
NEPRO-217ENST00000486271 GYS1P13807 737 aa12.9□□□□□ -0.34
NEPRO-217ENST00000486271 HLTFQ14527 1009 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEPRO-217ENST00000486271 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms