RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 DTX3Q8N9I9 347 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 PIP4K2CQ8TBX8 421 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 DVL3Q92997 716 aaPredicted RBP5.43□□□□□ -1.54
VPS50-217ENST00000485140 KISS1RQ969F8 398 aaPredicted RBP5.43□□□□□ -1.54
VPS50-217ENST00000485140 OSBP2Q969R2 916 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 SEC61A2Q9H9S3 476 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 FBXL7Q9UJT9 491 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 FBXO10Q9UK96 956 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
VPS50-217ENST00000485140 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 EFCAB14O75071 495 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 GRIA2P42262 883 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 PPP2CBP62714 309 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 PPP2CAP67775 309 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 NFKB2Q00653 900 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 NFATC3Q12968 1075 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 TUSC3Q13454 348 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 PAN2Q504Q3 1202 aaKnown RBP5.42□□□□□ -1.54
VPS50-217ENST00000485140 HS1BP3Q53T59 392 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 NAALADL2Q58DX5 795 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 KCTD1Q719H9 257 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 CIR1Q86X95 450 aaPredicted RBP5.42□□□□□ -1.54
VPS50-217ENST00000485140 LOXL4Q96JB6 756 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 TANGO6Q9C0B7 1094 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 DUSP10Q9Y6W6 482 aa5.42□□□□□ -1.54
VPS50-217ENST00000485140 ADAM17P78536 824 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 SF3A1Q15459 793 aaKnown RBP5.41□□□□□ -1.54
VPS50-217ENST00000485140 FIGNQ5HY92 759 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 RALYLQ86SE5 291 aaKnown RBP5.41□□□□□ -1.54
VPS50-217ENST00000485140 MTDHQ86UE4 582 aaKnown RBP5.41□□□□□ -1.54
VPS50-217ENST00000485140 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
VPS50-217ENST00000485140 IGDCC4Q8TDY8 1250 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 FBXW5Q969U6 566 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 JAM3Q9BX67 310 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 ARHGAP20Q9P2F6 1191 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 ADAM29Q9UKF5 820 aa5.41□□□□□ -1.54
VPS50-217ENST00000485140 TRBV23-1A0A0A0MS06 115 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 SLC27A2O14975 620 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 SSRP1Q08945 709 aaKnown RBP5.4□□□□□ -1.54
VPS50-217ENST00000485140 GPR19Q15760 415 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 Q6ZUG5 572 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.54
VPS50-217ENST00000485140 KBTBD2Q8IY47 623 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 AJUBAQ96IF1 538 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 JADE2Q9NQC1 790 aa5.4□□□□□ -1.54
VPS50-217ENST00000485140 H0Y858 1186 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 NPTXRO95502 500 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 HERVK_113P62684 666 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 ST5P78524 1137 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 CRY1Q16526 586 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 SKIDA1Q1XH10 827 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 TMC5Q6UXY8 1006 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 C16orf59Q7L2K0 433 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 WDR48Q8TAF3 677 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 ZCCHC14Q8WYQ9 949 aaKnown RBP5.39□□□□□ -1.55
VPS50-217ENST00000485140 MKL1Q969V6 931 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 MBD6Q96DN6 1003 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 SCYL1Q96KG9 808 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 JAG2Q9Y219 1238 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 TCAF1Q9Y4C2 921 aa5.39□□□□□ -1.55
VPS50-217ENST00000485140 ZNF839A8K0R7 811 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 B4GALT3O60512 393 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 MSCO60682 206 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 MLLT6P55198 1093 aaPredicted RBP5.38□□□□□ -1.55
VPS50-217ENST00000485140 NTRK3Q16288 839 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 ZMAT1Q5H9K5 638 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 CD276Q5ZPR3 534 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 STK32CQ86UX6 486 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 CLEC4DQ8WXI8 215 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 ZSWIM3Q96MP5 696 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 KCNJ15Q99712 375 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 SRPK3Q9UPE1 567 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 TSC22D4Q9Y3Q8 395 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 ATP23Q9Y6H3 246 aa5.38□□□□□ -1.55
VPS50-217ENST00000485140 ARVCFO00192 962 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 KNG1P01042 644 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 CKMP06732 381 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 ZNF20P17024 532 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 SELENOPP49908 381 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 GUCY1A3Q02108 690 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 USP10Q14694 798 aaKnown RBP5.37□□□□□ -1.55
VPS50-217ENST00000485140 KCNT2Q6UVM3 1135 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 USP51Q70EK9 711 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 DHRS4Q9BTZ2 278 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 CARD11Q9BXL7 1154 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 IPPKQ9H8X2 491 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 KCND1Q9NSA2 647 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 CATSPERZQ9NTU4 200 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 ARHGAP28Q9P2N2 729 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 ZFP69BQ9UJL9 534 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 SLC4A7Q9Y6M7 1214 aa5.37□□□□□ -1.55
VPS50-217ENST00000485140 KLHL18O94889 574 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 POLD1P28340 1107 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 PFKPQ01813 784 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 RBL2Q08999 1139 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 DBPQ10586 325 aaPredicted RBP5.36□□□□□ -1.55
VPS50-217ENST00000485140 BTBD8Q5XKL5 378 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 ARHGAP36Q6ZRI8 547 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 PROSER1Q86XN7 944 aa5.36□□□□□ -1.55
VPS50-217ENST00000485140 ZSWIM2Q8NEG5 633 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms