RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 MSH4O15457 936 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 SYN1P17600 705 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 TCF7P36402 384 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-213ENST00000485080 ACTR2P61160 394 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 ZNF746Q6NUN9 644 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-213ENST00000485080 PIK3AP1Q6ZUJ8 805 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 SLC5A5Q92911 643 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 TRPV6Q9H1D0 765 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 FOXP1Q9H334 677 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-213ENST00000485080 PKD2L1Q9P0L9 805 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 GTF2IRD1Q9UHL9 959 aa20.16■□□□□ 0.82
SREBF1-213ENST00000485080 ZNF215Q9UL58 517 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-213ENST00000485080 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-213ENST00000485080 IGKV6D-21A0A0A0MT36 114 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 TDP2O95551 362 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 TIMP1P01033 207 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
SREBF1-213ENST00000485080 ABHD15Q6UXT9 468 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 C7orf31Q8N865 590 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 SNX21Q969T3 373 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 SMARCAD1Q9H4L7 1026 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 PRDM5Q9NQX1 630 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-213ENST00000485080 TRMT13Q9NUP7 481 aaKnown RBP20.15■□□□□ 0.82
SREBF1-213ENST00000485080 HDAC6Q9UBN7 1215 aa20.15■□□□□ 0.82
SREBF1-213ENST00000485080 LTBP2Q14767 1821 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 CCNE2O96020 404 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 MAGEA10P43363 369 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-213ENST00000485080 KRT76Q01546 638 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 SP4Q02446 784 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 LETM2Q2VYF4 491 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 FAM47CQ5HY64 1035 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 PLPPR4Q7Z2D5 763 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-213ENST00000485080 ETNPPLQ8TBG4 499 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 FAM20AQ96MK3 541 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 CTAGE1Q96RT6 745 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 PCYT2Q99447 389 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 LBHD1Q9BQE6 289 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-213ENST00000485080 ERAP1Q9NZ08 941 aa20.14■□□□□ 0.81
SREBF1-213ENST00000485080 DDX25Q9UHL0 483 aaKnown RBP20.14■□□□□ 0.81
SREBF1-213ENST00000485080 A0A1W2PPC1 479 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 TBX3O15119 743 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 RAG1P15918 1043 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 ITGB8P26012 769 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 SLC26A2P50443 739 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 GDF6Q6KF10 455 aaPredicted RBP20.13■□□□□ 0.81
SREBF1-213ENST00000485080 B3GNT9Q6UX72 402 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 AFAP1L1Q8TED9 768 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 NOC4LQ9BVI4 516 aaKnown RBP20.13■□□□□ 0.81
SREBF1-213ENST00000485080 KCNMB3Q9NPA1 279 aa20.13■□□□□ 0.81
SREBF1-213ENST00000485080 PSMD10O75832 226 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 U2AF2P26368 475 aaKnown RBP eCLIP20.12■□□□□ 0.81
SREBF1-213ENST00000485080 GUCY1B3Q02153 619 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 RBL2Q08999 1139 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 PTGISQ16647 500 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
SREBF1-213ENST00000485080 MFSD5Q6N075 450 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 TRIM50Q86XT4 487 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 RDM1Q8NG50 284 aa20.12■□□□□ 0.81
SREBF1-213ENST00000485080 FAM205CA6NFA0 338 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 PITPNM1O00562 1244 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 SLC37A4O43826 429 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 GAS7O60861 476 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 SMIM10L2AP0DMW4 78 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 SMIM10L2BP0DMW5 78 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 GNAT1P11488 350 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 GJB2P29033 226 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 ADAM17P78536 824 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 LRCH2Q5VUJ6 765 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 MIS18BP1Q6P0N0 1132 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 CHRDL2Q6WN34 429 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 GLG1Q92896 1179 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
SREBF1-213ENST00000485080 INTS4Q96HW7 963 aaKnown RBP20.11■□□□□ 0.81
SREBF1-213ENST00000485080 HIPK3Q9H422 1215 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 AZI2Q9H6S1 392 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 TCEAL9Q9UHQ7 104 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 PCDHA10Q9Y5I2 948 aa20.11■□□□□ 0.81
SREBF1-213ENST00000485080 NRCAMQ92823 1304 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 WDR64B1ANS9 1081 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 CCNT1O60563 726 aaKnown RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 SFNP31947 248 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 TRAPPC10P48553 1259 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 STAT5BP51692 787 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 FOSBP53539 338 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 MDM2Q00987 491 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 ORC2Q13416 577 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 NOSTRINQ8IVI9 506 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 CAGE1Q8TC20 777 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 BADQ92934 168 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 TEKT3Q9BXF9 490 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 RNPEPQ9H4A4 650 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 COLQQ9Y215 455 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 MAFBQ9Y5Q3 323 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 LAMA2P24043 3122 aaKnown RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
SREBF1-213ENST00000485080 TRIP12Q14669 1992 aaPredicted RBP20.1■□□□□ 0.81
SREBF1-213ENST00000485080 C17orf102A2RUQ5 167 aa20.09■□□□□ 0.81
SREBF1-213ENST00000485080 DDX39AO00148 427 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms