RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 KIF18BQ86Y91 864 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 ANKRD42Q8N9B4 389 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 LINC00116Q8NCU8 138 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 GSTCDQ8NEC7 633 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 PANK1Q8TE04 598 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 PPP1R14AQ96A00 147 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 CLIP3Q96DZ5 547 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 MAGEB10Q96LZ2 347 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-214ENST00000483925 SLC13A1Q9BZW2 595 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTCD3-214ENST00000483925 MAN1C1Q9NR34 630 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 SUCOQ9UBS9 1254 aaKnown RBP5.54□□□□□ -1.52
PTCD3-214ENST00000483925 GTF2A1LQ9UNN4 478 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 GIT1Q9Y2X7 761 aa5.54□□□□□ -1.52
PTCD3-214ENST00000483925 TMEM82A0PJX8 343 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 N4BP3O15049 544 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 SASH1O94885 1247 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 UBOX5O94941 541 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 RECQLP46063 649 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 ZNF280AP59817 542 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 GRB10Q13322 594 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 GBX1Q14549 363 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 NBPF9Q3BBW0 867 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 ARHGAP29Q52LW3 1261 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 COBLL1Q53SF7 1204 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 L1TD1Q5T7N2 865 aaKnown RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 OLFML2BQ68BL8 750 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 CDCA2Q69YH5 1023 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 HEATR6Q6AI08 1181 aaKnown RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 TOGARAM2Q6ZUX3 1019 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 TMC3Q7Z5M5 1100 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 ZNF354CQ86Y25 554 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 TPH2Q8IWU9 490 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 COG1Q8WTW3 980 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 DACT3Q96B18 629 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-214ENST00000483925 HHIPL1Q96JK4 782 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 SLC52A2Q9HAB3 445 aa5.53□□□□□ -1.52
PTCD3-214ENST00000483925 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 K7ESF4 209 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 NOP56O00567 594 aaKnown RBP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ABLIM1O14639 778 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ITGAVP06756 1048 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 SYPP08247 313 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 PF4V1P10720 104 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 SYN1P17600 705 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 VIPR1P32241 457 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 CASP2P42575 452 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 AFF3P51826 1226 aaKnown RBP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 GJA9P57773 515 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 RTP1P59025 263 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 YBX1P67809 324 aaKnown RBP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ZNF460Q14592 562 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 KRT72Q14CN4 511 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 NBPF12Q5TAG4 269 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ZNF227Q86WZ6 799 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 FAM9BQ8IZU0 186 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 PTPRN2Q92932 1015 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 GJA10Q969M2 543 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 OSBP2Q969R2 916 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 TIFAQ96CG3 184 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 FUBP3Q96I24 572 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTCD3-214ENST00000483925 WNK4Q96J92 1243 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 TNIP3Q96KP6 325 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 SCLT1Q96NL6 688 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 ORAI3Q9BRQ5 295 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 CNTD2Q9H8S5 307 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 PLCB1Q9NQ66 1216 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 RTEL1Q9NZ71 1219 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
PTCD3-214ENST00000483925 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-214ENST00000483925 FKTNO75072 461 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 PRKD3O94806 890 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 C6orf222P0C671 652 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-214ENST00000483925 MYBL2P10244 700 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 HALP42357 657 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 EPHB3P54753 998 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 SLC9A5Q14940 896 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 TMEM240Q5SV17 173 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 GPR158Q5T848 1215 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 ZNF280DQ6N043 979 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 ZPBP2Q6X784 338 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 MAMDC2Q7Z304 686 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-214ENST00000483925 CPA6Q8N4T0 437 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-214ENST00000483925 AIFM3Q96NN9 605 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 HAUS7Q99871 368 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 GBP3Q9H0R5 595 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 XYLT2Q9H1B5 865 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
PTCD3-214ENST00000483925 LUZP4Q9P127 313 aa5.51□□□□□ -1.53
PTCD3-214ENST00000483925 FRMPD2Q68DX3 1309 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 KLRG2A4D1S0 409 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 CFAP69A5D8W1 941 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 WTIPA6NIX2 430 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-214ENST00000483925 SIGLEC6O43699 453 aa5.5□□□□□ -1.53
PTCD3-214ENST00000483925 ULK1O75385 1050 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms