RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 NOC3LQ8WTT2 800 aaKnown RBP29.23■■■□□ 2.27
SHOX2-204ENST00000483851 CACTINQ8WUQ7 758 aaKnown RBP29.23■■■□□ 2.27
SHOX2-204ENST00000483851 SPATC1LQ9H0A9 340 aa29.23■■■□□ 2.27
SHOX2-204ENST00000483851 BTBD7Q9P203 1132 aa29.23■■■□□ 2.27
SHOX2-204ENST00000483851 SLC25A27O95847 323 aa29.22■■■□□ 2.27
SHOX2-204ENST00000483851 MYCLP12524 364 aaPredicted RBP29.22■■■□□ 2.27
SHOX2-204ENST00000483851 CCNE1P24864 410 aa29.22■■■□□ 2.27
SHOX2-204ENST00000483851 FRMD3A2A2Y4 597 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 SSBP05455 408 aaKnown RBP eCLIP29.21■■■□□ 2.27
SHOX2-204ENST00000483851 IDEP14735 1019 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 GSDMDP57764 484 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 GUF1Q8N442 669 aaKnown RBP29.21■■■□□ 2.27
SHOX2-204ENST00000483851 GTF3C2Q8WUA4 911 aaPredicted RBP29.21■■■□□ 2.27
SHOX2-204ENST00000483851 CDHR1Q96JP9 859 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 INPP4AQ96PE3 977 aaPredicted RBP29.21■■■□□ 2.27
SHOX2-204ENST00000483851 POTEJP0CG39 1038 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 KIAA0895Q8NCT3 520 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 ZFP91Q96JP5 570 aaPredicted RBP29.21■■■□□ 2.27
SHOX2-204ENST00000483851 NACC1Q96RE7 527 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 PANK4Q9NVE7 773 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 RGL1Q9NZL6 768 aa29.21■■■□□ 2.27
SHOX2-204ENST00000483851 CYP4A11Q02928 519 aa29.2■■■□□ 2.26
SHOX2-204ENST00000483851 P2RX5Q93086 422 aa29.2■■■□□ 2.26
SHOX2-204ENST00000483851 DYDC2Q96IM9 177 aa29.2■■■□□ 2.26
SHOX2-204ENST00000483851 MAPK8IP1Q9UQF2 711 aa29.2■■■□□ 2.26
SHOX2-204ENST00000483851 LRRC10BA6NIK2 292 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 CHMP2AO43633 222 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 FCER1AP12319 257 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 PSMC6P62333 389 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 ANKRD20A12PQ8NF67 263 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 RDM1Q8NG50 284 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 KCND2Q9NZV8 630 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 COASYQ13057 564 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 ITGB3BPQ13352 177 aaPredicted RBP29.19■■■□□ 2.26
SHOX2-204ENST00000483851 ARSHQ5FYA8 562 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 GPAT2Q6NUI2 795 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 TTI2Q6NXR4 508 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 MIER3Q7Z3K6 550 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 ANKRD35Q8N283 1001 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 THAP9Q9H5L6 903 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 PNMA3Q9UL41 463 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 SLC45A1Q9Y2W3 748 aa29.19■■■□□ 2.26
SHOX2-204ENST00000483851 A0A1B0GTH6 734 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 TRAF5O00463 557 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 SFNP31947 248 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 KRT76Q01546 638 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 CENPPQ6IPU0 288 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 TPH2Q8IWU9 490 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 RRAGCQ9HB90 399 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 LIMA1Q9UHB6 759 aaKnown RBP29.18■■■□□ 2.26
SHOX2-204ENST00000483851 TCEAL9Q9UHQ7 104 aa29.18■■■□□ 2.26
SHOX2-204ENST00000483851 KIF20AO95235 890 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 KRT18P05783 430 aaKnown RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 P4HBP07237 508 aaKnown RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 GJA5P36382 358 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 JAK3P52333 1124 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 CTTNQ14247 550 aaKnown RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 LRRC8AQ8IWT6 810 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 PURBQ96QR8 312 aaKnown RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 SLC39A2Q9NP94 309 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 TESPA1A2RU30 521 aaPredicted RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 GNPTABQ3T906 1256 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 FILIP1LQ4L180 1135 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 FAM26FQ5R3K3 315 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 APTXQ7Z2E3 356 aaKnown RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 VSTM4Q8IW00 320 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 BHMT2Q9H2M3 363 aa29.17■■■□□ 2.26
SHOX2-204ENST00000483851 GBA2Q9HCG7 927 aaPredicted RBP29.17■■■□□ 2.26
SHOX2-204ENST00000483851 LCTP09848 1927 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 CNMDO75829 334 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 LYPLA2O95372 231 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 GIT2Q14161 759 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 NR1I3Q14994 352 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 SENP7Q9BQF6 1050 aa29.16■■■□□ 2.26
SHOX2-204ENST00000483851 MOV10L1Q9BXT6 1211 aaKnown RBP29.16■■■□□ 2.26
SHOX2-204ENST00000483851 ADD3Q9UEY8 706 aaKnown RBP29.16■■■□□ 2.26
SHOX2-204ENST00000483851 EEF1GP26641 437 aaKnown RBP29.15■■■□□ 2.26
SHOX2-204ENST00000483851 TRIM47Q96LD4 638 aa29.15■■■□□ 2.26
SHOX2-204ENST00000483851 ZSWIM4Q9H7M6 989 aa29.15■■■□□ 2.26
SHOX2-204ENST00000483851 ZNF408Q9H9D4 720 aa29.15■■■□□ 2.26
SHOX2-204ENST00000483851 SRCAPQ6ZRS2 3230 aa29.15■■■□□ 2.26
SHOX2-204ENST00000483851 CETPP11597 493 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 GTF2A2P52657 109 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 LRRC63Q05C16 580 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 ZNF746Q6NUN9 644 aaPredicted RBP29.14■■■□□ 2.26
SHOX2-204ENST00000483851 C2orf69Q8N8R5 385 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 PRIMPOLQ96LW4 560 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 LXNQ9BS40 222 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 RBPJLQ9UBG7 517 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 NFASCO94856 1347 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 B4DLN1 442 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 STXBP2Q15833 593 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 HSP90AA4PQ58FG1 418 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 TCP11X2Q5H9J9 407 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 TMC6Q7Z403 805 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 NCAPG2Q86XI2 1143 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 FAM114A1Q8IWE2 563 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 MYOCDQ8IZQ8 938 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 PCDHA2Q9Y5H9 948 aa29.14■■■□□ 2.26
SHOX2-204ENST00000483851 WDR64B1ANS9 1081 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms