RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 CTDNEP1O95476 244 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 IQCF3P0C7M6 154 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 GNAT1P11488 350 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 USP11P51784 963 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 PTK7Q13308 1070 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 ITGB3BPQ13352 177 aaPredicted RBP14.29□□□□□ -0.12
COMMD2-205ENST00000483708 PSRC1Q6PGN9 363 aaPredicted RBP14.29□□□□□ -0.12
COMMD2-205ENST00000483708 TRIM50Q86XT4 487 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 WASF1Q92558 559 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 GTF3C6Q969F1 213 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 UIMC1Q96RL1 719 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 CTAGE1Q96RT6 745 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 RNPEPQ9H4A4 650 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 SMARCAD1Q9H4L7 1026 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 KCNJ14Q9UNX9 436 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 LIMCH1Q9UPQ0 1083 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 NFASCO94856 1347 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 MYH6P13533 1939 aa14.29□□□□□ -0.12
COMMD2-205ENST00000483708 IGLV3-22A0A075B6J6 115 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 IPO5O00410 1097 aaKnown RBP14.28□□□□□ -0.12
COMMD2-205ENST00000483708 CIITAP33076 1130 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 RFC2P35250 354 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 ACTR2P61160 394 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 SETQ01105 290 aaPredicted RBP14.28□□□□□ -0.12
COMMD2-205ENST00000483708 HIC1Q14526 733 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 PRR16Q569H4 304 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 GPR153Q6NV75 609 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 DEFB128Q7Z7B8 93 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 AFAP1L1Q8TED9 768 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
COMMD2-205ENST00000483708 ZNF577Q9BSK1 485 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 AZI2Q9H6S1 392 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 STK36Q9NRP7 1315 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 SETD4Q9NVD3 440 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 ERAP1Q9NZ08 941 aa14.28□□□□□ -0.12
COMMD2-205ENST00000483708 M0R2N6 131 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 DDX39AO00148 427 aaKnown RBP14.27□□□□□ -0.13
COMMD2-205ENST00000483708 CKBP12277 381 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 SELPP16109 830 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 MARK3P27448 753 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 DAGLBQ8NCG7 672 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 HERVK_113Q902F9 699 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 KIF2CQ99661 725 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 FTOQ9C0B1 505 aaKnown RBP eCLIP14.27□□□□□ -0.13
COMMD2-205ENST00000483708 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
COMMD2-205ENST00000483708 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
COMMD2-205ENST00000483708 TBC1D22BQ9NU19 505 aa14.27□□□□□ -0.13
COMMD2-205ENST00000483708 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 DHX15O43143 795 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 TREHO43280 583 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 EDIL3O43854 480 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 LGR5O75473 907 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 PFKMP08237 780 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 HOXC8P31273 242 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 THPOP40225 353 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 RBM25P49756 843 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 SMAD3P84022 425 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 NPY5RQ15761 445 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 TRIM71Q2Q1W2 868 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 LRRC8DQ7L1W4 858 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 PLPPR4Q7Z2D5 763 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 SERINC5Q86VE9 423 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 NSUN7Q8NE18 718 aaKnown RBP14.26□□□□□ -0.13
COMMD2-205ENST00000483708 VWCEQ96DN2 955 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 PCYT2Q99447 389 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 GJB4Q9NTQ9 266 aa14.26□□□□□ -0.13
COMMD2-205ENST00000483708 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 JAK2O60674 1132 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 ATG7O95352 703 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 PARNO95453 639 aaKnown RBP14.25□□□□□ -0.13
COMMD2-205ENST00000483708 CCNE2O96020 404 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 ACTN1P12814 892 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 STAT5BP51692 787 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 RBL2Q08999 1139 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 PPFIA1Q13136 1202 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 NONOQ15233 471 aaKnown RBP eCLIP14.25□□□□□ -0.13
COMMD2-205ENST00000483708 ZNF618Q5T7W0 954 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 RASIP1Q5U651 963 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 ABHD15Q6UXT9 468 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 DEFB123Q8N688 67 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
COMMD2-205ENST00000483708 WNT8BQ93098 351 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 ZSCAN31Q96LW9 406 aaPredicted RBP14.25□□□□□ -0.13
COMMD2-205ENST00000483708 CXXC1Q9P0U4 656 aaPredicted RBP14.25□□□□□ -0.13
COMMD2-205ENST00000483708 TCEAL9Q9UHQ7 104 aa14.25□□□□□ -0.13
COMMD2-205ENST00000483708 EMSYQ7Z589 1322 aa14.24□□□□□ -0.13
COMMD2-205ENST00000483708 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
COMMD2-205ENST00000483708 ZBBXA8MT70 800 aa14.24□□□□□ -0.13
COMMD2-205ENST00000483708 BACH1O14867 736 aa14.24□□□□□ -0.13
COMMD2-205ENST00000483708 MSH4O15457 936 aa14.24□□□□□ -0.13
COMMD2-205ENST00000483708 CYP3A7P24462 503 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms