RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 FKBP1AP62942 108 aaKnown RBP13.72□□□□□ -0.21
LINC00477-201ENST00000483544 VWA3BQ502W6 1294 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 MIIPQ5JXC2 388 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 CCDC122Q5T0U0 273 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 SPATA21Q7Z572 469 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 LRRC15Q8TF66 581 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 JAKMIP2Q96AA8 810 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 ANKZF1Q9H8Y5 726 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
LINC00477-201ENST00000483544 MTMR7Q9Y216 660 aa13.72□□□□□ -0.21
LINC00477-201ENST00000483544 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 POLRMTO00411 1230 aaKnown RBP13.71□□□□□ -0.21
LINC00477-201ENST00000483544 COBLO75128 1261 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
LINC00477-201ENST00000483544 LCA5LO95447 670 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 FESP07332 822 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 LIG3P49916 1009 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 VAV2P52735 878 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 HERVK_113P62684 666 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 EHHADHQ08426 723 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 TMED1Q13445 227 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 SPA17Q15506 151 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 FBXW10Q5XX13 1052 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 KCTD17Q8N5Z5 321 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 KIAA0895Q8NCT3 520 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 C3orf20Q8ND61 904 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 CEP63Q96MT8 703 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 PNMA5Q96PV4 448 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 PLIN2Q99541 437 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 UBA5Q9GZZ9 404 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
LINC00477-201ENST00000483544 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 GUCA1BQ9UMX6 200 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 SAR1BQ9Y6B6 198 aa13.71□□□□□ -0.21
LINC00477-201ENST00000483544 MYMKA6NI61 221 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 EBAG9O00559 213 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ZBTB5O15062 677 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ECEL1O95672 775 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 PRLRP16471 622 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 FNTAP49354 379 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 USP11P51784 963 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 GTF2IP78347 998 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ITIH3Q06033 890 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 KIF5AQ12840 1032 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 BEND6Q5SZJ8 279 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SNX29Q8TEQ0 813 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 DCAF4Q8WV16 495 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 JMJD4Q9H9V9 463 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 KIF9Q9HAQ2 790 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 LRRC4BQ9NT99 713 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 PUF60Q9UHX1 559 aaKnown RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 FAM169AQ9Y6X4 670 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ARFGEF1Q9Y6D6 1849 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SHOX2O60902 331 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 AKR1B1P15121 316 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 HDLBPQ00341 1268 aaKnown RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 ADGRF4Q8IZF3 695 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 CCDC155Q8N6L0 562 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 TRIM58Q8NG06 486 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SNRNP27Q8WVK2 155 aaKnown RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SYN2Q92777 582 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 CCDC42Q96M95 316 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 PCMTD1Q96MG8 357 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 OSBPL9Q96SU4 736 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 DHX36Q9H2U1 1008 aaKnown RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 NDST4Q9H3R1 872 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SEMA6BQ9H3T3 888 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 VIPAS39Q9H9C1 493 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 TRPC5Q9UL62 973 aaPredicted RBP13.7□□□□□ -0.22
LINC00477-201ENST00000483544 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 SIK3Q9Y2K2 1263 aa13.7□□□□□ -0.22
LINC00477-201ENST00000483544 CYP3A7-CYP3A51PA0A087WV96 503 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 RASSF10A6NK89 507 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 FCER1AP12319 257 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
LINC00477-201ENST00000483544 NPR1P16066 1061 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 CYP3A7P24462 503 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 AP3B2Q13367 1082 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 CCDC70Q6NSX1 233 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 CCDC65Q8IXS2 484 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 SLFN12Q8IYM2 578 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 MYOCDQ8IZQ8 938 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 PROCA1Q8NCQ7 364 aaPredicted RBP13.69□□□□□ -0.22
LINC00477-201ENST00000483544 MIPOL1Q8TD10 442 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 EZH1Q92800 747 aaPredicted RBP13.69□□□□□ -0.22
LINC00477-201ENST00000483544 TEKT1Q969V4 418 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 RMI1Q9H9A7 625 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 LUC7LQ9NQ29 371 aaKnown RBP13.69□□□□□ -0.22
LINC00477-201ENST00000483544 USP40Q9NVE5 1235 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 NYAP2Q9P242 653 aa13.69□□□□□ -0.22
LINC00477-201ENST00000483544 DDX25Q9UHL0 483 aaKnown RBP13.69□□□□□ -0.22
LINC00477-201ENST00000483544 FRMPD2Q68DX3 1309 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms