RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 TBC1D22BQ9NU19 505 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 KIAA1468Q9P260 1216 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
TSPAN1-208ENST00000482928 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 MAFGO15525 162 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 CAVIN2O95810 425 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 ARP10275 920 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 ALDH5A1P51649 535 aaPredicted RBP13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 FAM110CQ1W6H9 321 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 Q3C1V9 767 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 VSIG10LQ86VR7 867 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 PAGE5Q96GU1 130 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 PURBQ96QR8 312 aaKnown RBP13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 ZFYVE28Q9HCC9 887 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 AGO4Q9HCK5 861 aaKnown RBP13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 KCNH7Q9NS40 1196 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 MORF4L1Q9UBU8 362 aa13.97□□□□□ -0.17
TSPAN1-208ENST00000482928 A0A087X0B3 334 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 GTPBP6O43824 516 aaPredicted RBP13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 ECM2O94769 699 aaPredicted RBP13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 ITGB5P18084 799 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 MAPK4P31152 587 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 MRE11P49959 708 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 CNTN2Q02246 1040 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 SP3Q02447 781 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 PPP2R5CQ13362 524 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 E2F4Q16254 413 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 POTEEQ6S8J3 1075 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 SV2BQ7L1I2 683 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 MIER3Q7Z3K6 550 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 IFNL1Q8IU54 200 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 ERCC4Q92889 916 aaPredicted RBP13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 PTPN18Q99952 460 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 RMND1Q9NWS8 449 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 DACH1Q9UI36 760 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 SAMM50Q9Y512 469 aa13.96□□□□□ -0.17
TSPAN1-208ENST00000482928 ASB14A6NK59 587 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 BIN1O00499 593 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 STRNO43815 780 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 PSMD10O75832 226 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 FARP2O94887 1054 aaPredicted RBP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 SSBP05455 408 aaKnown RBP eCLIP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 MYL1P05976 194 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 PGK2P07205 417 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 NLRP12P59046 1061 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 CAP1Q01518 475 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 ANO6Q4KMQ2 910 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 ZNF697Q5TEC3 545 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 GRAMD1CQ8IYS0 662 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 NEK9Q8TD19 979 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 CDX2Q99626 313 aaPredicted RBP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 PORCNQ9H237 461 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 GRPEL1Q9HAV7 217 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 BMP2KQ9NSY1 1161 aaPredicted RBP13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 CPA4Q9UI42 421 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 VAV3Q9UKW4 847 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 MUC6Q6W4X9 2439 aa13.95□□□□□ -0.18
TSPAN1-208ENST00000482928 LOC102724159A0A0B4J2E5 919 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 IGF2BP3O00425 579 aaKnown RBP eCLIP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 KRT18P05783 430 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 PRR29P0C7W0 189 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 JAK3P52333 1124 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 KRT76Q01546 638 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 GRB10Q13322 594 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 PWP2Q15269 919 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 DPP9Q86TI2 863 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 RNF214Q8ND24 703 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 LARP4BQ92615 738 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 STAMQ92783 540 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 CCDC43Q96MW1 224 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 INPP4AQ96PE3 977 aaPredicted RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 EIF2AK1Q9BQI3 630 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 UNC45AQ9H3U1 944 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 TUFT1Q9NNX1 390 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 KIAA1024Q9UPX6 916 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 DNM3Q9UQ16 869 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 PCDHA5Q9Y5H7 936 aa13.94□□□□□ -0.18
TSPAN1-208ENST00000482928 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 SOWAHBA6NEL2 793 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 BECN2A8MW95 431 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 GOLGA6L19H0YKK7 550 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 RPA1P27694 616 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 ADORA2AP29274 412 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 SFNP31947 248 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 TPM4P67936 248 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 CYP4A11Q02928 519 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 ARHGEF6Q15052 776 aa13.93□□□□□ -0.18
TSPAN1-208ENST00000482928 EPHA7Q15375 998 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms