RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 ZNF274Q96GC6 653 aaPredicted RBP17.52■□□□□ 0.4
EXOSC3-205ENST00000482614 SLC26A6Q9BXS9 759 aa17.52■□□□□ 0.4
EXOSC3-205ENST00000482614 PCDHA11Q9Y5I1 949 aa17.52■□□□□ 0.4
EXOSC3-205ENST00000482614 NFASCO94856 1347 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 GSTTP1A0A1W2PQM5 241 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 TREHO43280 583 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 CXCL10P02778 98 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 GPNMBQ14956 572 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 GRIN2CQ14957 1233 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 CNKSR3Q6P9H4 555 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 CYP2W1Q8TAV3 490 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 WNT8BQ93098 351 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 SLC9A7Q96T83 725 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 NKX2-4Q9H2Z4 354 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 SMARCAD1Q9H4L7 1026 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 PDRG1Q9NUG6 133 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 SETD4Q9NVD3 440 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 SLC9A2Q9UBY0 812 aa17.51■□□□□ 0.39
EXOSC3-205ENST00000482614 MEIS1O00470 390 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 EIF5BO60841 1220 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 NBNO60934 754 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 ARP10275 920 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 FOSL2P15408 326 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 THPOP40225 353 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 TRAF7Q6Q0C0 670 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 TRIM22Q8IYM9 498 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 REXO1Q8N1G1 1221 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 GLG1Q92896 1179 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 UPF3BQ9BZI7 483 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 NCOA5Q9HCD5 579 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 YBX2Q9Y2T7 364 aaKnown RBP17.5■□□□□ 0.39
EXOSC3-205ENST00000482614 EMSYQ7Z589 1322 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 NRCAMQ92823 1304 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 RSPH10B2B2RC85 870 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 CAND2O75155 1236 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 CYP3A4P08684 503 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 RSPH10BP0C881 870 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 KCNJ6P48051 423 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 RABGGTBP53611 331 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 SSRP1Q08945 709 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 AGO4Q9HCK5 861 aaKnown RBP17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 SH3GLB2Q9NR46 395 aa17.49■□□□□ 0.39
EXOSC3-205ENST00000482614 ABHD14A-ACY1A0A1B0GW23 586 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 CPLX1O14810 134 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 EFCAB14O75071 495 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 LGR5O75473 907 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 ANAPC15P60006 121 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 ADAM17P78536 824 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 PLA2G4DQ86XP0 818 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 CRYGNQ8WXF5 182 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 TNPO1Q92973 898 aaKnown RBP17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 AZI2Q9H6S1 392 aa17.48■□□□□ 0.39
EXOSC3-205ENST00000482614 COL6A3P12111 3177 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 MARK3P27448 753 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 ACTR2P61160 394 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 WDR5P61964 334 aaKnown RBP17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 IKBKEQ14164 716 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 PPP2R2DQ66LE6 453 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 HERC6Q8IVU3 1022 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 GAS2L1Q99501 681 aaPredicted RBP17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 VPS54Q9P1Q0 977 aa17.47■□□□□ 0.39
EXOSC3-205ENST00000482614 IGLV3-22A0A075B6J6 115 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 FAM86B1E9PN63 330 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 ATG7O95352 703 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 DEXIO95424 95 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 FAM86B2P0C5J1 330 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 MYOGP15173 224 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 NLRP5P59047 1200 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 SETQ01105 290 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 STK3Q13188 491 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 ITGB3BPQ13352 177 aaPredicted RBP17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 PLPPR4Q7Z2D5 763 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 PCYT2Q99447 389 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 PRDM12Q9H4Q4 367 aa17.46■□□□□ 0.39
EXOSC3-205ENST00000482614 RRN3P2A6NIE6 340 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 STAT5BP51692 787 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 GRIK4Q16099 956 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 FAM26DQ5JW98 314 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 TAF2Q6P1X5 1199 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 RPAINQ86UA6 219 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
EXOSC3-205ENST00000482614 IPO5O00410 1097 aaKnown RBP17.44■□□□□ 0.38
EXOSC3-205ENST00000482614 CTSHP09668 335 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms