RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 PDIA3P30101 505 aaKnown RBP17.89■□□□□ 0.45
COL16A1-212ENST00000482478 CLK2P49760 499 aaKnown RBP17.89■□□□□ 0.45
COL16A1-212ENST00000482478 PPFIA1Q13136 1202 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 HIC1Q14526 733 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 CEP55Q53EZ4 464 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 PPP2R2DQ66LE6 453 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 CPLX2Q6PUV4 134 aaKnown RBP17.89■□□□□ 0.45
COL16A1-212ENST00000482478 SERINC5Q86VE9 423 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 LMBR1Q8WVP7 490 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 VWCEQ96DN2 955 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 TM6SF1Q9BZW5 370 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 SLC9A2Q9UBY0 812 aa17.89■□□□□ 0.45
COL16A1-212ENST00000482478 DDX39AO00148 427 aaKnown RBP17.88■□□□□ 0.45
COL16A1-212ENST00000482478 IFNAR1P17181 557 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 ZNF618Q5T7W0 954 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 MAFAQ8NHW3 353 aaPredicted RBP17.88■□□□□ 0.45
COL16A1-212ENST00000482478 BICD2Q8TD16 824 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 RASGRP4Q8TDF6 673 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 SEPT1Q8WYJ6 367 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 LARP6Q9BRS8 491 aaKnown RBP17.88■□□□□ 0.45
COL16A1-212ENST00000482478 ZMYND12Q9H0C1 365 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 AZI2Q9H6S1 392 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 ERAP1Q9NZ08 941 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 YBX2Q9Y2T7 364 aaKnown RBP17.88■□□□□ 0.45
COL16A1-212ENST00000482478 EMSYQ7Z589 1322 aa17.88■□□□□ 0.45
COL16A1-212ENST00000482478 MAFGO15525 162 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 TREHO43280 583 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 NBNO60934 754 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
COL16A1-212ENST00000482478 GRIN2CQ14957 1233 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 PKN1Q16512 942 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 TRIM71Q2Q1W2 868 aaKnown RBP17.87■□□□□ 0.45
COL16A1-212ENST00000482478 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 SLC17A8Q8NDX2 589 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 CYP2W1Q8TAV3 490 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 SLC28A3Q9HAS3 691 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 AGO4Q9HCK5 861 aaKnown RBP17.87■□□□□ 0.45
COL16A1-212ENST00000482478 TRPC6Q9Y210 931 aa17.87■□□□□ 0.45
COL16A1-212ENST00000482478 RSPH10B2B2RC85 870 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 RSPH10BP0C881 870 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 ARP10275 920 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 HOXC8P31273 242 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 SSRP1Q08945 709 aaKnown RBP17.86■□□□□ 0.45
COL16A1-212ENST00000482478 NTRK3Q16288 839 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 MCTP2Q6DN12 878 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 PLA2G4DQ86XP0 818 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 GAS2L1Q99501 681 aaPredicted RBP17.86■□□□□ 0.45
COL16A1-212ENST00000482478 RNPEPQ9H4A4 650 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 PCDHA11Q9Y5I1 949 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 NFASCO94856 1347 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 COL6A3P12111 3177 aa17.86■□□□□ 0.45
COL16A1-212ENST00000482478 TRIP12Q14669 1992 aaPredicted RBP17.86■□□□□ 0.45
COL16A1-212ENST00000482478 GSTTP1A0A1W2PQM5 241 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 CAND2O75155 1236 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 CDKL5O76039 1030 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 CXCL10P02778 98 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 CA3P07451 260 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 MYOGP15173 224 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 EVCP57679 992 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 NLRP5P59047 1200 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 ACTR2P61160 394 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 WDR5P61964 334 aaKnown RBP17.85■□□□□ 0.45
COL16A1-212ENST00000482478 IGBP1P78318 339 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 ITGB3BPQ13352 177 aaPredicted RBP17.85■□□□□ 0.45
COL16A1-212ENST00000482478 GRIK4Q16099 956 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 NRCAMQ92823 1304 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 SMARCAD1Q9H4L7 1026 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 TUBE1Q9UJT0 475 aa17.85■□□□□ 0.45
COL16A1-212ENST00000482478 FAM86B1E9PN63 330 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 BACH1O14867 736 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
COL16A1-212ENST00000482478 LGR5O75473 907 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 DEXIO95424 95 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 FAM86B2P0C5J1 330 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 MBTPS1Q14703 1052 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 TRAF7Q6Q0C0 670 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 HERC6Q8IVU3 1022 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
COL16A1-212ENST00000482478 UIMC1Q96RL1 719 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 PRDM12Q9H4Q4 367 aa17.84■□□□□ 0.45
COL16A1-212ENST00000482478 KIF28PB7ZC32 967 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 EFCAB14O75071 495 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 ANAPC15P60006 121 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 DEFB103AP81534 67 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 PRR16Q569H4 304 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 TAF2Q6P1X5 1199 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 NIPA1Q7RTP0 329 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 ZNF577Q9BSK1 485 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 ZBED2Q9BTP6 218 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
COL16A1-212ENST00000482478 TET1Q8NFU7 2136 aa17.83■□□□□ 0.44
COL16A1-212ENST00000482478 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
COL16A1-212ENST00000482478 MEIS1O00470 390 aa17.82■□□□□ 0.44
COL16A1-212ENST00000482478 ADAMTS3O15072 1205 aa17.82■□□□□ 0.44
COL16A1-212ENST00000482478 TLL1O43897 1013 aa17.82■□□□□ 0.44
COL16A1-212ENST00000482478 IKBKEQ14164 716 aa17.82■□□□□ 0.44
COL16A1-212ENST00000482478 GPNMBQ14956 572 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms