RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS52-218ENST00000482399 FGGP02679 453 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 DPP8Q6V1X1 898 aaPredicted RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 GUF1Q8N442 669 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 CCDC26Q8TAB7 109 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 CXorf56Q9H5V9 222 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 KLC4Q9NSK0 619 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 SIK3Q9Y2K2 1263 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 PTPN22Q9Y2R2 807 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 SPDYE3A6NKU9 549 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 GNPATO15228 680 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 XRCC5P13010 732 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 HSD17B3P37058 310 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 CLNS1AP54105 237 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 PTK2Q05397 1052 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 GRIK5Q16478 980 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 IFI16Q16666 785 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 CCDC38Q502W7 563 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 PRR16Q569H4 304 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 OTUD6AQ7L8S5 288 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 KCNK9Q9NPC2 374 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 SNX24Q9Y343 169 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 GRIN2DO15399 1336 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 POTEFA5A3E0 1075 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 GMNCA6NCL1 334 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 PGRMC1O00264 195 aaKnown RBP13.9□□□□□ -0.18
VPS52-218ENST00000482399 FLOT1O75955 427 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 POTEEQ6S8J3 1075 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 RAD54LQ92698 747 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 HDAC9Q9UKV0 1011 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 STK38LQ9Y2H1 464 aa13.9□□□□□ -0.18
VPS52-218ENST00000482399 VPS41P49754 854 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 TTBK2Q6IQ55 1244 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 INTS5Q6P9B9 1019 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 MSL3Q8N5Y2 521 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 ANKRD42Q8N9B4 389 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 WHAMMQ8TF30 809 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 CEP72Q9P209 647 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 HMGB1P1B2RPK0 211 aaPredicted RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 SLURP2P0DP57 97 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 PDHBP11177 359 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 SLC18A3Q16572 532 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 TPTE2Q6XPS3 522 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 PKD2L1Q9P0L9 805 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 RTCBQ9Y3I0 505 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 ZC3H4Q9UPT8 1303 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 UFL1O94874 794 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 PLA2G4BP0C869 781 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 CYP2J2P51589 502 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 ZKSCAN8Q15776 578 aaPredicted RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 SLC30A10Q6XR72 485 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 TBC1D1Q86TI0 1168 aaPredicted RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 MRRFQ96E11 262 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
VPS52-218ENST00000482399 MAGEF1Q9HAY2 307 aa13.89□□□□□ -0.19
VPS52-218ENST00000482399 MYH15Q9Y2K3 1946 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 A0A1W2PQJ5 194 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 SSR1P43307 286 aaKnown RBP13.88□□□□□ -0.19
VPS52-218ENST00000482399 SNCBQ16143 134 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 MFSD14BQ5SR56 506 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 GALNT17Q6IS24 598 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 RNF10Q8N5U6 811 aaKnown RBP13.88□□□□□ -0.19
VPS52-218ENST00000482399 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 PNMA2Q9UL42 364 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 GOLGA6L10A0A0M3HER8 536 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 GRID2IPA4D2P6 1211 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 A6NNZ2 444 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 KCNMA1Q12791 1236 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 TCP10Q12799 353 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 LRRC14Q15048 493 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 CDC37Q16543 378 aaPredicted RBP13.88□□□□□ -0.19
VPS52-218ENST00000482399 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 TUBB8Q3ZCM7 444 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 GLE1Q53GS7 698 aaKnown RBP13.88□□□□□ -0.19
VPS52-218ENST00000482399 USP38Q8NB14 1042 aa13.88□□□□□ -0.19
VPS52-218ENST00000482399 THOC1Q96FV9 657 aaKnown RBP13.88□□□□□ -0.19
VPS52-218ENST00000482399 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms