RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 GPR20Q99678 358 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 BACH2Q9BYV9 841 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 UPF2Q9HAU5 1272 aaKnown RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 RALGAPA2Q2PPJ7 1873 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 NLRC5Q86WI3 1866 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 MEIS2O14770 477 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 AMHP03971 560 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 KIF5BP33176 963 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 THPOP40225 353 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 SKIV2LQ15477 1246 aaKnown RBP13.3□□□□□ -0.28
GARNL3-217ENST00000481875 FCHSD1Q86WN1 690 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 TOP1MTQ969P6 601 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 LY9Q9HBG7 655 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 TAF6LQ9Y6J9 622 aa13.3□□□□□ -0.28
GARNL3-217ENST00000481875 PIEZO1Q92508 2521 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 SLC27A2O14975 620 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 MAFGO15525 162 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 TREHO43280 583 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 LIFRP42702 1097 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 GNAQP50148 359 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 CREB3L3Q68CJ9 461 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 TMCO2Q7Z6W1 182 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 APBB2Q92870 758 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 CDHR1Q96JP9 859 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 ZNF215Q9UL58 517 aaPredicted RBP13.29□□□□□ -0.28
GARNL3-217ENST00000481875 NRCAMQ92823 1304 aa13.29□□□□□ -0.28
GARNL3-217ENST00000481875 FAM43BQ6ZT52 329 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-217ENST00000481875 CYFIP1Q7L576 1253 aa13.28□□□□□ -0.28
GARNL3-217ENST00000481875 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
GARNL3-217ENST00000481875 CTCFLQ8NI51 663 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-217ENST00000481875 SEPT8Q92599 483 aa13.28□□□□□ -0.28
GARNL3-217ENST00000481875 GPRASP2Q96D09 838 aa13.28□□□□□ -0.28
GARNL3-217ENST00000481875 TMEM87BQ96K49 555 aa13.28□□□□□ -0.28
GARNL3-217ENST00000481875 NECAB3Q96P71 396 aaPredicted RBP13.28□□□□□ -0.28
GARNL3-217ENST00000481875 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.27□□□□□ -0.29
GARNL3-217ENST00000481875 H3BNC9 293 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 RPLP2P05387 115 aaKnown RBP13.27□□□□□ -0.29
GARNL3-217ENST00000481875 HSPA4P34932 840 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 LEXMQ3ZCV2 418 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 TAF2Q6P1X5 1199 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 NLRX1Q86UT6 975 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 SMARCC2Q8TAQ2 1214 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 GDPD5Q8WTR4 605 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 CUL5Q93034 780 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 MRPL38Q96DV4 380 aaKnown RBP13.27□□□□□ -0.29
GARNL3-217ENST00000481875 EHMT1Q9H9B1 1298 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 TRIOO75962 3097 aa13.27□□□□□ -0.29
GARNL3-217ENST00000481875 MBLAC1A4D2B0 266 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-217ENST00000481875 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 CALM1P0DP23 149 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 CALM2P0DP24 149 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 CALM3P0DP25 149 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 MCM5P33992 734 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 EPC2Q52LR7 807 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 USP17L6PQ6QN14 398 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 UBE2ZQ9H832 354 aaPredicted RBP13.26□□□□□ -0.29
GARNL3-217ENST00000481875 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
GARNL3-217ENST00000481875 SQORQ9Y6N5 450 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
GARNL3-217ENST00000481875 GPR37L1O60883 481 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 CHRNA1P02708 482 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 RB1P06400 928 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 KCNA2P16389 499 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 KRT32Q14532 448 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 PTPROQ16827 1216 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
GARNL3-217ENST00000481875 SGMS1Q86VZ5 419 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
GARNL3-217ENST00000481875 NEK9Q8TD19 979 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 ZFP91Q96JP5 570 aaPredicted RBP13.25□□□□□ -0.29
GARNL3-217ENST00000481875 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 OSBPL7Q9BZF2 842 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 PSTPIP2Q9H939 334 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 UBIAD1Q9Y5Z9 338 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 LOXHD1Q8IVV2 1947 aa13.25□□□□□ -0.29
GARNL3-217ENST00000481875 MUC6Q6W4X9 2439 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 PI4K2BG5E9Z4 385 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
GARNL3-217ENST00000481875 NCK2O43639 380 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 PRC1O43663 620 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 ATP9AO75110 1047 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 ITGB5P18084 799 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 TSGA10IPQ3SY00 556 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 TIGD5Q53EQ6 642 aa13.24□□□□□ -0.29
GARNL3-217ENST00000481875 FAM178BQ8IXR5 827 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms