RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SYNRGQ9UMZ2 1314 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 WDR64B1ANS9 1081 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 CTAGE5O15320 804 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 ADAMTS4O75173 837 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 CCNE2O96020 404 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 GJB1P08034 283 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 LONP1P36776 959 aaKnown RBP23.34■■□□□ 1.33
VPS16-207ENST00000481812 TECP42680 631 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 CPT1AP50416 773 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 ACTR2P61160 394 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 IL17AQ16552 155 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 KRI1Q8N9T8 703 aaKnown RBP23.34■■□□□ 1.33
VPS16-207ENST00000481812 KLHDC9Q8NEP7 349 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 AK8Q96MA6 479 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 GPR20Q99678 358 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 PCDHA10Q9Y5I2 948 aa23.34■■□□□ 1.33
VPS16-207ENST00000481812 MYH9P35579 1960 aaKnown RBP23.33■■□□□ 1.33
VPS16-207ENST00000481812 GSTTP1A0A1W2PQM5 241 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 DDX39AO00148 427 aaKnown RBP23.33■■□□□ 1.33
VPS16-207ENST00000481812 NOP56O00567 594 aaKnown RBP23.33■■□□□ 1.33
VPS16-207ENST00000481812 MARCKSP29966 332 aaPredicted RBP23.33■■□□□ 1.33
VPS16-207ENST00000481812 EPHA7Q15375 998 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 ABHD15Q6UXT9 468 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 MIER3Q7Z3K6 550 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 AFG1LQ8WV93 481 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 LENG1Q96BZ8 264 aaPredicted RBP23.33■■□□□ 1.33
VPS16-207ENST00000481812 DISC1Q9NRI5 854 aa23.33■■□□□ 1.33
VPS16-207ENST00000481812 IGKV6D-21A0A0A0MT36 114 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 VWA3AA6NCI4 1184 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 KPNA6O60684 536 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 MMP3P08254 477 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 FSCN1Q16658 493 aaKnown RBP23.32■■□□□ 1.32
VPS16-207ENST00000481812 CSPP1Q1MSJ5 1256 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 MIS18BP1Q6P0N0 1132 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 RNF180Q86T96 592 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 ZNF579Q8NAF0 562 aaKnown RBP23.32■■□□□ 1.32
VPS16-207ENST00000481812 ARRDC4Q8NCT1 418 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 CHAMP1Q96JM3 812 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 DEFB118Q96PH6 123 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 CRISPLD2Q9H0B8 497 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 OGDHLQ9ULD0 1010 aa23.32■■□□□ 1.32
VPS16-207ENST00000481812 EML1O00423 815 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 SLC26A4O43511 780 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 ZEB2O60315 1214 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 CUTAO60888 179 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 LGR5O75473 907 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 PGK1P00558 417 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 PSAPP07602 524 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 C6orf222P0C671 652 aaPredicted RBP23.31■■□□□ 1.32
VPS16-207ENST00000481812 PTGS1P23219 599 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 DGKDQ16760 1214 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 NEK9Q8TD19 979 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 TSEN34Q9BSV6 310 aaKnown RBP23.31■■□□□ 1.32
VPS16-207ENST00000481812 LRWD1Q9UFC0 647 aa23.31■■□□□ 1.32
VPS16-207ENST00000481812 POTEMA6NI47 508 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 SORBS3O60504 671 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 SGPL1O95470 568 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 SUPT20HL2P0C7V6 817 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 TCF7P36402 384 aaPredicted RBP23.3■■□□□ 1.32
VPS16-207ENST00000481812 LRRC41Q15345 812 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 GNASQ5JWF2 1037 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 NCAPH2Q6IBW4 605 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
VPS16-207ENST00000481812 PCSK9Q8NBP7 692 aaKnown RBP23.3■■□□□ 1.32
VPS16-207ENST00000481812 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 PCDHA7Q9UN72 937 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 EMSYQ7Z589 1322 aa23.3■■□□□ 1.32
VPS16-207ENST00000481812 CHMP2AO43633 222 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 MUTP22033 750 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 ME1P48163 572 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 GJA8P48165 433 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 SP4Q02446 784 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 AXDND1Q5T1B0 1012 aaPredicted RBP23.29■■□□□ 1.32
VPS16-207ENST00000481812 AFAP1L1Q8TED9 768 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 TMEM106CQ9BVX2 250 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 TELO2Q9Y4R8 837 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 SAMM50Q9Y512 469 aa23.29■■□□□ 1.32
VPS16-207ENST00000481812 KIAA0100Q14667 2235 aaKnown RBP23.28■■□□□ 1.32
VPS16-207ENST00000481812 DKC1O60832 514 aaKnown RBP eCLIP23.28■■□□□ 1.32
VPS16-207ENST00000481812 P4HBP07237 508 aaKnown RBP23.28■■□□□ 1.32
VPS16-207ENST00000481812 GRIN1Q05586 938 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 FAM160B1Q5W0V3 765 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 HAUS3Q68CZ6 603 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 ADALQ6DHV7 355 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 PLPPR4Q7Z2D5 763 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 TMEM87AQ8NBN3 555 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 U2AF1L4Q8WU68 220 aaKnown RBP23.28■■□□□ 1.32
VPS16-207ENST00000481812 GBP4Q96PP9 640 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 HSD17B14Q9BPX1 270 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 EIF2AK1Q9BQI3 630 aaKnown RBP23.28■■□□□ 1.32
VPS16-207ENST00000481812 POLR3CQ9BUI4 534 aaPredicted RBP23.28■■□□□ 1.32
VPS16-207ENST00000481812 CSRNP2Q9H175 543 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 SMARCAD1Q9H4L7 1026 aa23.28■■□□□ 1.32
VPS16-207ENST00000481812 MYADML2A6NDP7 307 aa23.27■■□□□ 1.32
VPS16-207ENST00000481812 MOXD2PA6NHM9 499 aa23.27■■□□□ 1.32
VPS16-207ENST00000481812 MYCP01106 439 aaPredicted RBP23.27■■□□□ 1.32
VPS16-207ENST00000481812 RPA1P27694 616 aa23.27■■□□□ 1.32
VPS16-207ENST00000481812 SLC26A2P50443 739 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms