RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 EXOC7Q9UPT5 735 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 ECEL1O95672 775 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 ASPRV1Q53RT3 343 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 GJA10Q969M2 543 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 CARD10Q9BWT7 1032 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 UFL1O94874 794 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 PRLRP16471 622 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 PSMC2P35998 433 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 SRBD1Q8N5C6 995 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 CYFIP2Q96F07 1278 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 DDX47Q9H0S4 455 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
DDX39B-219ENST00000481456 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.41
DDX39B-219ENST00000481456 SMIM24O75264 130 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 MYL7Q01449 175 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 TMED8Q6PL24 325 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-219ENST00000481456 LRRC8CQ8TDW0 803 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 VTI1AQ96AJ9 217 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 NMT2O60551 498 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 PLA2G4BP0C869 781 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 PMS2P54278 862 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 MESDQ14696 234 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 NTRK3Q16288 839 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 PHLDB2Q86SQ0 1253 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 SYNE4Q8N205 404 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 RDH13Q8NBN7 331 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 INTS13Q9NVM9 706 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 PODXLO00592 558 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 MDM2Q00987 491 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-219ENST00000481456 MECOMQ03112 1051 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 STRN3Q13033 797 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 PHLDB3Q6NSJ2 640 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
DDX39B-219ENST00000481456 UBE2Q2LH0YL09 131 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 CARSP49589 748 aaKnown RBP12.51□□□□□ -0.41
DDX39B-219ENST00000481456 COL9A3Q14050 684 aaPredicted RBP12.51□□□□□ -0.41
DDX39B-219ENST00000481456 AGBL2Q5U5Z8 902 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 SPATA24Q86W54 205 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 FAM186BQ8IYM0 893 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 ANKRD35Q8N283 1001 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 ERGIC2Q96RQ1 377 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
DDX39B-219ENST00000481456 KLK7P49862 253 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 GRM4Q14833 912 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 CDC37Q16543 378 aaPredicted RBP12.5□□□□□ -0.41
DDX39B-219ENST00000481456 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 BARHL2Q9NY43 387 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 XDHP47989 1333 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 ORC4O43929 436 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 CSF1RP07333 972 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 SMTNP53814 917 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 CDK17Q00537 523 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 C3orf20Q8ND61 904 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 AZI2Q9H6S1 392 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 USP17L3A6NCW0 530 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 USP17L4A6NCW7 530 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 GAP43P17677 238 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 USP17L1Q7RTZ2 530 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
DDX39B-219ENST00000481456 ZBTB21Q9ULJ3 1066 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 AGTPBP1Q9UPW5 1226 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 BTDP43251 543 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
DDX39B-219ENST00000481456 COASYQ13057 564 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 PABPC4Q13310 644 aaKnown RBP eCLIP12.5□□□□□ -0.41
DDX39B-219ENST00000481456 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 DYNLL2Q96FJ2 89 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 SEC16BQ96JE7 1060 aa12.5□□□□□ -0.41
DDX39B-219ENST00000481456 I3L4J1 428 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 VPS41P49754 854 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SESN3P58005 492 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 USTQ9Y2C2 406 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
DDX39B-219ENST00000481456 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SEC24CP53992 1094 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SH3BGRP55822 239 aaPredicted RBP12.49□□□□□ -0.41
DDX39B-219ENST00000481456 MYO1EQ12965 1108 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 CAVIN3Q969G5 261 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 TRIM4Q9C037 500 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 GGA1Q9UJY5 639 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SNX24Q9Y343 169 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 SYNGAP1Q96PV0 1343 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 AGLP35573 1532 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
DDX39B-219ENST00000481456 USH1GQ495M9 461 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 RHOT2Q8IXI1 618 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 ARL8AQ96BM9 186 aa12.49□□□□□ -0.41
DDX39B-219ENST00000481456 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms