RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SGSM3Q96HU1 749 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 FCRL2Q96LA5 508 aaPredicted RBP9.07□□□□□ -0.96
CBX3-206ENST00000481057 ZSWIM4Q9H7M6 989 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 ZMYM5Q9UJ78 669 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 GPR55Q9Y2T6 319 aaPredicted RBP9.07□□□□□ -0.96
CBX3-206ENST00000481057 NSD2O96028 1365 aa9.07□□□□□ -0.96
CBX3-206ENST00000481057 CCDC88AQ3V6T2 1871 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 TOGARAM1Q9Y4F4 1720 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 KIF1BO60333 1816 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 A0A1W2PQU0 124 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 STXBP3O00186 592 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 AURKAO14965 403 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 GDNFP39905 211 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 DUSP4Q13115 394 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 NFE2L2Q16236 605 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 BTN2A2Q8WVV5 523 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 LINC01599Q8WXQ3 324 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 MAP6Q96JE9 813 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 ERVK13-1Q9NX77 482 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 EBF1Q9UH73 591 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 CTNND2Q9UQB3 1225 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 ANKRD36BQ8N2N9 1353 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 USP47Q96K76 1375 aa9.06□□□□□ -0.96
CBX3-206ENST00000481057 PPLO60437 1756 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 CAPNS1P04632 268 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 IL2RBP14784 551 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 HK2P52789 917 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 IFRD2Q12894 506 aaPredicted RBP9.05□□□□□ -0.96
CBX3-206ENST00000481057 PKN2Q16513 984 aaKnown RBP9.05□□□□□ -0.96
CBX3-206ENST00000481057 RCSD1Q6JBY9 416 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 NKX2-4Q9H2Z4 354 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 BACE2Q9Y5Z0 518 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 SLIT3O75094 1523 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
CBX3-206ENST00000481057 NUP155O75694 1391 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 EIF3AQ14152 1382 aaKnown RBP9.04□□□□□ -0.96
CBX3-206ENST00000481057 H0YGN5 161 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 FGF10O15520 208 aaPredicted RBP9.04□□□□□ -0.96
CBX3-206ENST00000481057 IGSF3O75054 1194 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 CHRNA5P30532 468 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 PPP2R2AP63151 447 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 LRRC47Q8N1G4 583 aaKnown RBP9.04□□□□□ -0.96
CBX3-206ENST00000481057 PDZD8Q8NEN9 1154 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 PIF1Q9H611 641 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 PFDN2Q9UHV9 154 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 STXBP5LQ9Y2K9 1186 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 NSD3Q9BZ95 1437 aa9.04□□□□□ -0.96
CBX3-206ENST00000481057 DIAPH1O60610 1272 aaKnown RBP9.03□□□□□ -0.96
CBX3-206ENST00000481057 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
CBX3-206ENST00000481057 CST9Q5W186 159 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 ANKS4BQ8N8V4 417 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 HHIPL1Q96JK4 782 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 SPATA9Q9BWV2 254 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 ARHGEF4Q9NR80 690 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 POGKQ9P215 609 aa9.03□□□□□ -0.96
CBX3-206ENST00000481057 C4BP0C0L5 1744 aa9.02□□□□□ -0.96
CBX3-206ENST00000481057 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.96
CBX3-206ENST00000481057 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 USP2O75604 605 aaPredicted RBP9.02□□□□□ -0.97
CBX3-206ENST00000481057 HPXP02790 462 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 KIR2DL1P43626 348 aaPredicted RBP9.02□□□□□ -0.97
CBX3-206ENST00000481057 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.97
CBX3-206ENST00000481057 CYP4F3Q08477 520 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 SCRN1Q12765 414 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 EEF1DP3Q658K8 133 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 CYP2R1Q6VVX0 501 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 NLGN1Q8N2Q7 840 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 NAT16Q8N8M0 369 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 COPS5Q92905 334 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 MRFAP1L1Q96HT8 127 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 DNAJC7Q99615 494 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 AARSD1Q9BTE6 412 aaKnown RBP9.02□□□□□ -0.97
CBX3-206ENST00000481057 SP110Q9HB58 689 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 CYP26B1Q9NR63 512 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 SAGE1Q9NXZ1 904 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 TNFRSF10DQ9UBN6 386 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 TAF1LQ8IZX4 1826 aa9.02□□□□□ -0.97
CBX3-206ENST00000481057 SCN4AP35499 1836 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 FADS2P1A8MWK0 482 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 ADCY3O60266 1144 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 GRIA2P42262 883 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 SEPHS1P49903 392 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 ERVFC1P60507 584 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 CHRNEQ04844 493 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 HSP90AA2PQ14568 343 aaPredicted RBP9.01□□□□□ -0.97
CBX3-206ENST00000481057 KSR1Q8IVT5 923 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 OXR1Q8N573 874 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 TMEM52Q8NDY8 209 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 PTCHD1Q96NR3 888 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 ADAMTSL1Q8N6G6 1762 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 MUC3AQ02505 3323 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 LAMA3Q16787 3333 aa9.01□□□□□ -0.97
CBX3-206ENST00000481057 LAMB4A4D0S4 1761 aa9□□□□□ -0.97
CBX3-206ENST00000481057 FITM1A5D6W6 292 aa9□□□□□ -0.97
CBX3-206ENST00000481057 SCG5P05408 212 aa9□□□□□ -0.97
CBX3-206ENST00000481057 HOXC12P31275 282 aa9□□□□□ -0.97
CBX3-206ENST00000481057 GFRA1P56159 465 aa9□□□□□ -0.97
CBX3-206ENST00000481057 TMF1P82094 1093 aa9□□□□□ -0.97
CBX3-206ENST00000481057 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
CBX3-206ENST00000481057 SAPCD2Q86UD0 394 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms