RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GJB1P08034 283 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 BTDP43251 543 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 GJA8P48165 433 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 RHBDL3P58872 404 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 UBXN2AP68543 259 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 MECOMQ03112 1051 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 GORABQ5T7V8 394 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 SPATA5Q8NB90 893 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 AGBL5Q8NDL9 886 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 SH3TC2Q8TF17 1288 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 NSUN4Q96CB9 384 aaKnown RBP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 NEUROD6Q96NK8 337 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 CORO1BQ9BR76 489 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 DHX36Q9H2U1 1008 aaKnown RBP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 ACSS3Q9H6R3 686 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 PAK6Q9NQU5 681 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 HMG20BQ9P0W2 317 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 COL2A1P02458 1487 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 FOCADQ5VW36 1801 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 CDK5RAP2Q96SN8 1893 aa7.91□□□□□ -1.14
LRCH3-216ENST00000481048 MYO5AQ9Y4I1 1855 aaKnown RBP7.91□□□□□ -1.14
LRCH3-216ENST00000481048 MYPNQ86TC9 1320 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 BAG3O95817 575 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 TRIM27P14373 513 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 CTGFP29279 349 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 ASPAP45381 313 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 PABPC4Q13310 644 aaKnown RBP eCLIP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 TMED8Q6PL24 325 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 ZNF512BQ96KM6 892 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 TRIM56Q9BRZ2 755 aaKnown RBP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 DDX4Q9NQI0 724 aaKnown RBP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 GINM1Q9NU53 330 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 PI4KBQ9UBF8 816 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 HERC5Q9UII4 1024 aaKnown RBP7.9□□□□□ -1.14
LRCH3-216ENST00000481048 AGTPBP1Q9UPW5 1226 aa7.9□□□□□ -1.14
LRCH3-216ENST00000481048 MYH1P12882 1939 aa7.9□□□□□ -1.15
LRCH3-216ENST00000481048 CARNS1A5YM72 827 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 CYP2C8P10632 490 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 JUNBP17275 347 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 ITGB5P18084 799 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 CAP2P40123 477 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 GCLCP48506 637 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 ATP8B2P98198 1209 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 PICALMQ13492 652 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 CCDC158Q5M9N0 1113 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 ZKSCAN2Q63HK3 967 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 GADL1Q6ZQY3 521 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 FOXP4Q8IVH2 680 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 SMCR8Q8TEV9 937 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 ZNF384Q8TF68 577 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 NOL10Q9BSC4 688 aaKnown RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 HTATIP2Q9BUP3 242 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 AS3MTQ9HBK9 375 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 RAI14Q9P0K7 980 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 LRP2BPQ9P2M1 347 aa7.89□□□□□ -1.15
LRCH3-216ENST00000481048 BIN2Q9UBW5 565 aaPredicted RBP7.89□□□□□ -1.15
LRCH3-216ENST00000481048 PNMA6EA0A0J9YXQ4 647 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 TRIM75PA6NK02 468 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 C19orf81C9J6K1 198 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 TNPO2O14787 897 aaKnown RBP7.88□□□□□ -1.15
LRCH3-216ENST00000481048 DYNC1LI2O43237 492 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-216ENST00000481048 ADCY3O60266 1144 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 BCAR3O75815 825 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 SGPL1O95470 568 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 B3GALT4O96024 378 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 CCL5P13501 91 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 MCAMP43121 646 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 FLT3LGP49771 235 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 PRKCZQ05513 592 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 FAM110CQ1W6H9 321 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 UBE2Q1Q7Z7E8 422 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 METTL16Q86W50 562 aaKnown RBP7.88□□□□□ -1.15
LRCH3-216ENST00000481048 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 TEX11Q8IYF3 940 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 CCDC82Q8N4S0 544 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 SSH3Q8TE77 659 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 FRAT1Q92837 279 aaPredicted RBP7.88□□□□□ -1.15
LRCH3-216ENST00000481048 COA7Q96BR5 231 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 C1GALT1Q9NS00 363 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 LOC285556D6RIA3 1793 aa7.88□□□□□ -1.15
LRCH3-216ENST00000481048 ASNSP08243 561 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 HOXA7P31268 230 aaPredicted RBP7.87□□□□□ -1.15
LRCH3-216ENST00000481048 SPP2Q13103 211 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 PDE3AQ14432 1141 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 TNNI3KQ59H18 835 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 TTC39AQ5SRH9 613 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 NAA16Q6N069 864 aaPredicted RBP7.87□□□□□ -1.15
LRCH3-216ENST00000481048 SEZ6L2Q6UXD5 910 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 ANKRD13CQ8N6S4 541 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 U2AF1L4Q8WU68 220 aaKnown RBP7.87□□□□□ -1.15
LRCH3-216ENST00000481048 DPF3Q92784 378 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 WDR18Q9BV38 432 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 GSX1Q9H4S2 264 aaPredicted RBP7.87□□□□□ -1.15
LRCH3-216ENST00000481048 GABRQQ9UN88 632 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 NOP58Q9Y2X3 529 aaKnown RBP7.87□□□□□ -1.15
LRCH3-216ENST00000481048 NR2E3Q9Y5X4 410 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 FPGT-TNNI3KV9GXZ4 949 aa7.87□□□□□ -1.15
LRCH3-216ENST00000481048 SURF6O75683 361 aaKnown RBP7.86□□□□□ -1.15
LRCH3-216ENST00000481048 FXR1P51114 621 aaKnown RBP eCLIP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms