RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 MTIF3Q9H2K0 278 aaKnown RBP22.92■■□□□ 1.26
VPS36-204ENST00000480923 DDX39AO00148 427 aaKnown RBP22.91■■□□□ 1.26
VPS36-204ENST00000480923 PFKMP08237 780 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 RFC2P35250 354 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 SMAD3P84022 425 aaKnown RBP22.91■■□□□ 1.26
VPS36-204ENST00000480923 OTOP2Q7RTS6 562 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 BLIDQ8IZY5 108 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 FAM177A1Q8N128 213 aaPredicted RBP22.91■■□□□ 1.26
VPS36-204ENST00000480923 HERVK_113Q902F9 699 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 RNPEPQ9H4A4 650 aa22.91■■□□□ 1.26
VPS36-204ENST00000480923 ORC3Q9UBD5 711 aaPredicted RBP22.91■■□□□ 1.26
VPS36-204ENST00000480923 DOCK5Q9H7D0 1870 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 IGLV3-22A0A075B6J6 115 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 CTDNEP1O95476 244 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 GNAT1P11488 350 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 SELPP16109 830 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 XBP1P17861 261 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 MARK3P27448 753 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 ACTR2P61160 394 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 SETQ01105 290 aaPredicted RBP22.9■■□□□ 1.26
VPS36-204ENST00000480923 PRR16Q569H4 304 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 GALNT17Q6IS24 598 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 Q7L0L9 218 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 LRRC8DQ7L1W4 858 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 DEFB123Q8N688 67 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 GTF3C6Q969F1 213 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 UIMC1Q96RL1 719 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 C22orf23Q9BZE7 217 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 FTOQ9C0B1 505 aaKnown RBP eCLIP22.9■■□□□ 1.26
VPS36-204ENST00000480923 SMARCAD1Q9H4L7 1026 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 AZI2Q9H6S1 392 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 SETD4Q9NVD3 440 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 KCNJ14Q9UNX9 436 aa22.9■■□□□ 1.26
VPS36-204ENST00000480923 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.89■■□□□ 1.25
VPS36-204ENST00000480923 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.89■■□□□ 1.25
VPS36-204ENST00000480923 CKBP12277 381 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 RBL2Q08999 1139 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 RASIP1Q5U651 963 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 SERINC5Q86VE9 423 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 DAGLBQ8NCG7 672 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 WASF1Q92558 559 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 WNT8BQ93098 351 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 ZNF577Q9BSK1 485 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 ERAP1Q9NZ08 941 aa22.89■■□□□ 1.25
VPS36-204ENST00000480923 CXXC1Q9P0U4 656 aaPredicted RBP22.89■■□□□ 1.25
VPS36-204ENST00000480923 EMSYQ7Z589 1322 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 ZBBXA8MT70 800 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 IPO5O00410 1097 aaKnown RBP22.88■■□□□ 1.25
VPS36-204ENST00000480923 TREHO43280 583 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 HOXC8P31273 242 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 CIITAP33076 1130 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 TRIM71Q2Q1W2 868 aaKnown RBP22.88■■□□□ 1.25
VPS36-204ENST00000480923 TBCKQ8TEA7 893 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 VWCEQ96DN2 955 aa22.88■■□□□ 1.25
VPS36-204ENST00000480923 LGR5O75473 907 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 ACTN1P12814 892 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 THPOP40225 353 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 USP11P51784 963 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 ZNF618Q5T7W0 954 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 ZNF697Q5TEC3 545 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 FAM109BQ6ICB4 259 aaPredicted RBP22.87■■□□□ 1.25
VPS36-204ENST00000480923 PCYT2Q99447 389 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 PHF20Q9BVI0 1012 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 TCEAL9Q9UHQ7 104 aa22.87■■□□□ 1.25
VPS36-204ENST00000480923 NRCAMQ92823 1304 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 M0R2N6 131 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 PARNO95453 639 aaKnown RBP22.86■■□□□ 1.25
VPS36-204ENST00000480923 CCNE2O96020 404 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 PPFIA1Q13136 1202 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 NONOQ15233 471 aaKnown RBP eCLIP22.86■■□□□ 1.25
VPS36-204ENST00000480923 NPY5RQ15761 445 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 KRT25Q7Z3Z0 450 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 LMBR1Q8WVP7 490 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 GJB4Q9NTQ9 266 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 TBC1D22BQ9NU19 505 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 LIMCH1Q9UPQ0 1083 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 SLC4A7Q9Y6M7 1214 aa22.86■■□□□ 1.25
VPS36-204ENST00000480923 BACH1O14867 736 aa22.85■■□□□ 1.25
VPS36-204ENST00000480923 DHX15O43143 795 aaKnown RBP22.85■■□□□ 1.25
VPS36-204ENST00000480923 STAT5BP51692 787 aa22.85■■□□□ 1.25
VPS36-204ENST00000480923 NSUN7Q8NE18 718 aaKnown RBP22.85■■□□□ 1.25
VPS36-204ENST00000480923 GRXCR1A8MXD5 290 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 EDIL3O43854 480 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 ATG7O95352 703 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 FDPSP14324 419 aaKnown RBP22.84■■□□□ 1.25
VPS36-204ENST00000480923 GRIK4Q16099 956 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 MIS18BP1Q6P0N0 1132 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 PLPPR4Q7Z2D5 763 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 LENG9Q96B70 501 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 FAM161BQ96MY7 647 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 KIF2CQ99661 725 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 UPF2Q9HAU5 1272 aaKnown RBP22.84■■□□□ 1.25
VPS36-204ENST00000480923 TRPC6Q9Y210 931 aa22.84■■□□□ 1.25
VPS36-204ENST00000480923 SZT2Q5T011 3432 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 CCDC194A0A1B0GVG4 234 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 RSPH10B2B2RC85 870 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 JAK2O60674 1132 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 NBNO60934 754 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 RSPH10BP0C881 870 aa22.83■■□□□ 1.25
VPS36-204ENST00000480923 RBM25P49756 843 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms