RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 EVCP57679 992 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 FUT2Q10981 343 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 SEMA3FQ13275 785 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 UBE2SQ16763 222 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 SEPT8Q92599 483 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 DHX38Q92620 1227 aaKnown RBP13.06□□□□□ -0.32
CCM2-213ENST00000480658 CTAGE1Q96RT6 745 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 TM6SF1Q9BZW5 370 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 SH3GLB2Q9NR46 395 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 KCNH7Q9NS40 1196 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
CCM2-213ENST00000480658 GRXCR1A8MXD5 290 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 CPLX1O14810 134 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 CDKL5O76039 1030 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 WDR5P61964 334 aaKnown RBP13.05□□□□□ -0.32
CCM2-213ENST00000480658 PPFIA1Q13136 1202 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 ZNF618Q5T7W0 954 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 RNPEPQ9H4A4 650 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 TBC1D22BQ9NU19 505 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 RNF216Q9NWF9 866 aaPredicted RBP13.05□□□□□ -0.32
CCM2-213ENST00000480658 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 TUBE1Q9UJT0 475 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 COL6A3P12111 3177 aa13.05□□□□□ -0.32
CCM2-213ENST00000480658 CDH23Q9H251 3354 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 hCG_1642624A0A1W2PR95 340 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 M0QZ92 97 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 DLL1O00548 723 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 SORBS3O60504 671 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 NBNO60934 754 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 CENPBP07199 599 aaPredicted RBP13.04□□□□□ -0.32
CCM2-213ENST00000480658 CA3P07451 260 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 CYP3A4P08684 503 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 IFNAR1P17181 557 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 CLK2P49760 499 aaKnown RBP13.04□□□□□ -0.32
CCM2-213ENST00000480658 ANAPC15P60006 121 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 SP4Q02446 784 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
CCM2-213ENST00000480658 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
CCM2-213ENST00000480658 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 GALNT17Q6IS24 598 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 PLPPR4Q7Z2D5 763 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
CCM2-213ENST00000480658 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 LMBR1Q8WVP7 490 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 TCEANC2Q96MN5 208 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 RAD9AQ99638 391 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 SQORQ9Y6N5 450 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 COL4A6Q14031 1691 aa13.04□□□□□ -0.32
CCM2-213ENST00000480658 MYH7BA7E2Y1 1941 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 MEIS1O00470 390 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 GJB5O95377 273 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 XBP1P17861 261 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 POU3F3P20264 500 aaPredicted RBP13.03□□□□□ -0.32
CCM2-213ENST00000480658 CDC27P30260 824 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 ANKRD1Q15327 319 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 GRIK4Q16099 956 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 AAK1Q2M2I8 961 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 FAM26DQ5JW98 314 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 IER5Q5VY09 327 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
CCM2-213ENST00000480658 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 ZNF274Q96GC6 653 aaPredicted RBP13.03□□□□□ -0.32
CCM2-213ENST00000480658 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 LMCD1Q9NZU5 365 aa13.03□□□□□ -0.32
CCM2-213ENST00000480658 YBX2Q9Y2T7 364 aaKnown RBP13.03□□□□□ -0.32
CCM2-213ENST00000480658 BAZ2BQ9UIF8 2168 aaKnown RBP13.03□□□□□ -0.32
CCM2-213ENST00000480658 MBLAC1A4D2B0 266 aaPredicted RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 TREHO43280 583 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 ATP9AO75110 1047 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 DEXIO95424 95 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 ADD1P35611 737 aaKnown RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 RABGGTBP53611 331 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 ADAM17P78536 824 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 KRT76Q01546 638 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 MIS18BP1Q6P0N0 1132 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 TRIM50Q86XT4 487 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 NME8Q8N427 588 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 AGO4Q9HCK5 861 aaKnown RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 FAM217BQ9NTX9 383 aaPredicted RBP13.02□□□□□ -0.33
CCM2-213ENST00000480658 SETD4Q9NVD3 440 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 TRPC6Q9Y210 931 aa13.02□□□□□ -0.33
CCM2-213ENST00000480658 RWDD3Q9Y3V2 267 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms